RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
CPNE1-206ENST00000412056 ECM2O94769 699 aaPredicted RBP16.39■□□□□ 0.21
CPNE1-206ENST00000412056 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
CPNE1-206ENST00000412056 MCCP23508 829 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 GCLCP48506 637 aaPredicted RBP16.39■□□□□ 0.21
CPNE1-206ENST00000412056 COG2Q14746 738 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 FAM110CQ1W6H9 321 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 C8orf34Q49A92 452 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 ANKS1AQ92625 1134 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 ATG4CQ96DT6 458 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 PAGR1Q9BTK6 254 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
CPNE1-206ENST00000412056 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
CPNE1-206ENST00000412056 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 PRC1O43663 620 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 CNMDO75829 334 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 BMP3P12645 472 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 DSG3P32926 999 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 SLC1A4P43007 532 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 GTF3C2Q8WUA4 911 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-206ENST00000412056 ERO1AQ96HE7 468 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 GMCL1Q96IK5 515 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 ARHGAP39Q9C0H5 1083 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 KAT14Q9H8E8 782 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 SENP2Q9HC62 589 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
CPNE1-206ENST00000412056 SMCHD1A6NHR9 2005 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 SEC24BO95487 1268 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 PDHBP11177 359 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 CTGFP29279 349 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 MCM5P33992 734 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-206ENST00000412056 KRT32Q14532 448 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 TMEM67Q5HYA8 995 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 IFIT1BQ5T764 474 aaKnown RBP16.37■□□□□ 0.21
CPNE1-206ENST00000412056 KCTD1Q719H9 257 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 DCAF4Q8WV16 495 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-206ENST00000412056 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 MORF4L1Q9UBU8 362 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 PPP1R9AQ9ULJ8 1098 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-206ENST00000412056 MYPNQ86TC9 1320 aa16.37■□□□□ 0.21
CPNE1-206ENST00000412056 ERICH2A1L162 156 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 TMEM232C9JQI7 657 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 WTAPQ15007 396 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 SART3Q15020 963 aaKnown RBP16.36■□□□□ 0.21
CPNE1-206ENST00000412056 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 TCEANC2Q96MN5 208 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
CPNE1-206ENST00000412056 SLF1Q9BQI6 1058 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 LRRC2Q9BYS8 371 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 HOXC10Q9NYD6 342 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 FEM1BQ9UK73 627 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
CPNE1-206ENST00000412056 ZNFX1Q9P2E3 1918 aaKnown RBP16.36■□□□□ 0.21
CPNE1-206ENST00000412056 PCNTO95613 3336 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 SNHG28P0DPA3 235 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 CPA1P15085 419 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 ERVK-24P63145 666 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 Q3C1V9 767 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 TMEM87BQ96K49 555 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 LY9Q9HBG7 655 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
CPNE1-206ENST00000412056 BAZ2BQ9UIF8 2168 aaKnown RBP16.34■□□□□ 0.21
CPNE1-206ENST00000412056 SH2B2O14492 632 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-206ENST00000412056 PSMC4P43686 418 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 STAT2P52630 851 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 IKQ13123 557 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-206ENST00000412056 KIF22Q14807 665 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-206ENST00000412056 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 CTU1Q7Z7A3 348 aaKnown RBP16.34■□□□□ 0.21
CPNE1-206ENST00000412056 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 GPRC5AQ8NFJ5 357 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
CPNE1-206ENST00000412056 VWA5AO00534 786 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 GOLGA8HP0CJ92 632 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 EXOSC10Q01780 885 aaKnown RBP16.33■□□□□ 0.2
CPNE1-206ENST00000412056 DHX32Q7L7V1 743 aaKnown RBP16.33■□□□□ 0.2
CPNE1-206ENST00000412056 MB21D1Q8N884 522 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 PRPF38AQ8NAV1 312 aaKnown RBP16.33■□□□□ 0.2
CPNE1-206ENST00000412056 REPS2Q8NFH8 660 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 CHURC1Q8WUH1 139 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 TRIM47Q96LD4 638 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 PORCNQ9H237 461 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
CPNE1-206ENST00000412056 PLA2G6O60733 806 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms