RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 PARP10Q53GL7 1025 aa16.11■□□□□ 0.17
ATRIP-204ENST00000412052 TYW1BQ6NUM6 668 aa16.11■□□□□ 0.17
ATRIP-204ENST00000412052 NELFBQ8WX92 580 aa16.11■□□□□ 0.17
ATRIP-204ENST00000412052 CHP1Q99653 195 aa16.11■□□□□ 0.17
ATRIP-204ENST00000412052 MTA3Q9BTC8 594 aa16.11■□□□□ 0.17
ATRIP-204ENST00000412052 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.11■□□□□ 0.17
ATRIP-204ENST00000412052 RHOXF2BP0C7M4 288 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 LONRF2Q1L5Z9 754 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 KIF4BQ2VIQ3 1234 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 RABGGTAQ92696 567 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 ARFGAP3Q9NP61 516 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 KIF5CO60282 957 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 SCG2P13521 617 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 TXLNAP40222 546 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 COPB1P53618 953 aaKnown RBP16.1■□□□□ 0.17
ATRIP-204ENST00000412052 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
ATRIP-204ENST00000412052 NSUN4Q96CB9 384 aaKnown RBP16.1■□□□□ 0.17
ATRIP-204ENST00000412052 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
ATRIP-204ENST00000412052 BRMS1Q9HCU9 246 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 DCP1AQ9NPI6 582 aaPredicted RBP16.1■□□□□ 0.17
ATRIP-204ENST00000412052 ABHD10Q9NUJ1 306 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATRIP-204ENST00000412052 ADAMTS2O95450 1211 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 PRCPP42785 496 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 LRRC15Q8TF66 581 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
ATRIP-204ENST00000412052 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
ATRIP-204ENST00000412052 ARHGAP25P42331 645 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 FILIP1LQ4L180 1135 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 SRGAP1Q7Z6B7 1085 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 TXNRD3Q86VQ6 643 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 IQUBQ8NA54 791 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 MARCH10Q8NA82 808 aaPredicted RBP16.09■□□□□ 0.17
ATRIP-204ENST00000412052 RBM28Q9NW13 759 aaKnown RBP16.09■□□□□ 0.17
ATRIP-204ENST00000412052 KCNJ18B7U540 433 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
ATRIP-204ENST00000412052 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 PAK1Q13153 545 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 KCNJ12Q14500 433 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 CAVIN4Q5BKX8 364 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 CPVLQ9H3G5 476 aa16.09■□□□□ 0.17
ATRIP-204ENST00000412052 GNL3LQ9NVN8 582 aaKnown RBP16.09■□□□□ 0.17
ATRIP-204ENST00000412052 A0A1B0GUL6 1792 aa16.08■□□□□ 0.17
ATRIP-204ENST00000412052 TPM1P09493 284 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 MCM6Q14566 821 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 SLC35G1Q2M3R5 365 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 NCAPH2Q6IBW4 605 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 IRF2BP1Q8IU81 584 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 TMEM60Q9H2L4 133 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 CDC23Q9UJX2 597 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 DDAH1O94760 285 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 RPN1P04843 607 aaKnown RBP16.08■□□□□ 0.16
ATRIP-204ENST00000412052 KRT9P35527 623 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 HNRNPH2P55795 449 aaKnown RBP16.08■□□□□ 0.16
ATRIP-204ENST00000412052 TCP11X2Q5H9J9 407 aa16.08■□□□□ 0.16
ATRIP-204ENST00000412052 NOA1Q8NC60 698 aaKnown RBP16.08■□□□□ 0.16
ATRIP-204ENST00000412052 REXO2Q9Y3B8 237 aaKnown RBP16.08■□□□□ 0.16
ATRIP-204ENST00000412052 NKRFO15226 690 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATRIP-204ENST00000412052 N4BP1O75113 896 aaKnown RBP16.07■□□□□ 0.16
ATRIP-204ENST00000412052 GPIHBP1Q8IV16 184 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 CTAGE1Q96RT6 745 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 HDAC6Q9UBN7 1215 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 LIMA1Q9UHB6 759 aaKnown RBP16.07■□□□□ 0.16
ATRIP-204ENST00000412052 ENC1O14682 589 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
ATRIP-204ENST00000412052 FGRP09769 529 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 UBXN1Q04323 297 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 PPP2R5BQ15173 497 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 DDB1Q16531 1140 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 PFKFB3Q16875 520 aaPredicted RBP16.07■□□□□ 0.16
ATRIP-204ENST00000412052 NAALADL2Q58DX5 795 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 C4orf32Q8N8J7 132 aa16.07■□□□□ 0.16
ATRIP-204ENST00000412052 NAA15Q9BXJ9 866 aaKnown RBP16.07■□□□□ 0.16
ATRIP-204ENST00000412052 UBE4AQ14139 1066 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 RWDD2AQ9UIY3 292 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 TTC26A0AVF1 554 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 CTAGE9A4FU28 777 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 USP17L3A6NCW0 530 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 USP17L4A6NCW7 530 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 STAT6P42226 847 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 KLK7P49862 253 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 VSNL1P62760 191 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 USP17L1Q7RTZ2 530 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 BSDC1Q9NW68 430 aaPredicted RBP16.06■□□□□ 0.16
ATRIP-204ENST00000412052 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 GUCA1BQ9UMX6 200 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 STRCQ7RTU9 1775 aa16.06■□□□□ 0.16
ATRIP-204ENST00000412052 BMP15O95972 392 aa16.05■□□□□ 0.16
ATRIP-204ENST00000412052 CALM1P0DP23 149 aa16.05■□□□□ 0.16
ATRIP-204ENST00000412052 CALM2P0DP24 149 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms