RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SLC25A27O95847 323 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ZNF697Q5TEC3 545 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 BADQ92934 168 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 MS4A1P11836 297 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 EEF2P13639 858 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ATP5JP18859 108 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SNX17Q15036 470 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 FAM47AQ5JRC9 791 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 MMP19Q99542 508 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 PLXNA1Q9UIW2 1896 aa17.16■□□□□ 0.34
HLA-DQB2-229ENST00000411527 CHGBP05060 677 aa17.15■□□□□ 0.34
HLA-DQB2-229ENST00000411527 PGK2P07205 417 aa17.15■□□□□ 0.34
HLA-DQB2-229ENST00000411527 C16orf86Q6ZW13 317 aa17.15■□□□□ 0.34
HLA-DQB2-229ENST00000411527 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
HLA-DQB2-229ENST00000411527 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-DQB2-229ENST00000411527 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
HLA-DQB2-229ENST00000411527 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
HLA-DQB2-229ENST00000411527 MYH7P12883 1935 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 RAD21O60216 631 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 RARBP10826 455 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 STAT3P40763 770 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 TLE2Q04725 743 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 KCTD2Q14681 263 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 C1orf53Q5VUE5 145 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 TRIM43Q96BQ3 446 aaPredicted RBP17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 HAUS7Q99871 368 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 TINF2Q9BSI4 451 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 COL25A1Q9BXS0 654 aaPredicted RBP17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 XPNPEP3Q9NQH7 507 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 NRBP1Q9UHY1 535 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
HLA-DQB2-229ENST00000411527 VWA5AO00534 786 aa17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 UBE3CQ15386 1083 aa17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ZNF792Q3KQV3 632 aa17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 CDX2Q99626 313 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 PHF24Q9UPV7 400 aa17.13■□□□□ 0.33
HLA-DQB2-229ENST00000411527 PGK1P00558 417 aa17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 TAL1P17542 331 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 RNF180Q86T96 592 aa17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 MIER1Q8N108 512 aa17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 PPP1R9AQ9ULJ8 1098 aa17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 DIS3Q9Y2L1 958 aaKnown RBP17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 TACC3Q9Y6A5 838 aa17.12■□□□□ 0.33
HLA-DQB2-229ENST00000411527 CUL9Q8IWT3 2517 aa17.11■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
HLA-DQB2-229ENST00000411527 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ZNF214Q9UL59 606 aaPredicted RBP17.11■□□□□ 0.33
HLA-DQB2-229ENST00000411527 LAMA2P24043 3122 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB2-229ENST00000411527 CLTBP09497 229 aa17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ZNF865P0CJ78 1059 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ITGB8P26012 769 aa17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 COPB2P35606 906 aa17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 SMAD3P84022 425 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 REPS2Q8NFH8 660 aa17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
HLA-DQB2-229ENST00000411527 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 A0A1W2PQ45 241 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 A0A1W2PQY0 241 aa17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 AKR1A1P14550 325 aa17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 RAG1P15918 1043 aa17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 LENG1Q96BZ8 264 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 ARPP21Q9UBL0 812 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB2-229ENST00000411527 KIAA0355O15063 1070 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SLC4A3P48751 1232 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 EPHB4P54760 987 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MAFAQ8NHW3 353 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MYLIPQ8WY64 445 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 DDX11Q96FC9 970 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 LRRCC1Q9C099 1032 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MKNK2Q9HBH9 465 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 TMEM39AQ9NV64 488 aa17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 GREB1LQ9C091 1923 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SMARCA5O60264 1052 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms