RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 NEDD1Q8NHV4 660 aa21.07■□□□□ 0.96
LSM5-204ENST00000409909 MKL1Q969V6 931 aa21.07■□□□□ 0.96
LSM5-204ENST00000409909 NUP88Q99567 741 aaPredicted RBP21.07■□□□□ 0.96
LSM5-204ENST00000409909 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.07■□□□□ 0.96
LSM5-204ENST00000409909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.07■□□□□ 0.96
LSM5-204ENST00000409909 F5H6K3 240 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 SDSP20132 328 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 TFAP4Q01664 338 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 KLRC3Q07444 240 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 GRB14Q14449 540 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 APBA2Q99767 749 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 CRISPLD2Q9H0B8 497 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 ANAPC4Q9UJX5 808 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 MYH4Q9Y623 1939 aa21.06■□□□□ 0.96
LSM5-204ENST00000409909 RPTORQ8N122 1335 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 NDUFB10O96000 172 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 FGAP02671 866 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 TSPY3P0CV98 308 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 TSPY8P0CW00 308 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 HSPD1P10809 573 aaKnown RBP21.05■□□□□ 0.96
LSM5-204ENST00000409909 PRKAR2AP13861 404 aaKnown RBP21.05■□□□□ 0.96
LSM5-204ENST00000409909 ZKSCAN1P17029 563 aaPredicted RBP21.05■□□□□ 0.96
LSM5-204ENST00000409909 ERCC3P19447 782 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 PDE4AP27815 886 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 TMEM132BQ14DG7 1078 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 TRMT44Q8IYL2 757 aaKnown RBP21.05■□□□□ 0.96
LSM5-204ENST00000409909 SHCBP1Q8NEM2 672 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 FLRT1Q9NZU1 646 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 PPP1R9AQ9ULJ8 1098 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
LSM5-204ENST00000409909 CEP290O15078 2479 aa21.04■□□□□ 0.96
LSM5-204ENST00000409909 COL11A1P12107 1806 aaPredicted RBP21.04■□□□□ 0.96
LSM5-204ENST00000409909 TTLL1O95922 423 aa21.04■□□□□ 0.96
LSM5-204ENST00000409909 TFRCP02786 760 aaKnown RBP21.04■□□□□ 0.96
LSM5-204ENST00000409909 CACNB2Q08289 660 aaPredicted RBP21.04■□□□□ 0.96
LSM5-204ENST00000409909 PLS1Q14651 629 aa21.04■□□□□ 0.96
LSM5-204ENST00000409909 HMX1Q9NP08 348 aaPredicted RBP21.04■□□□□ 0.96
LSM5-204ENST00000409909 IVNS1ABPQ9Y6Y0 642 aa21.04■□□□□ 0.96
LSM5-204ENST00000409909 VWA5AO00534 786 aa21.03■□□□□ 0.96
LSM5-204ENST00000409909 HOXC6P09630 235 aa21.03■□□□□ 0.96
LSM5-204ENST00000409909 NPLOC4Q8TAT6 608 aa21.03■□□□□ 0.96
LSM5-204ENST00000409909 CCDC171Q6TFL3 1326 aa21.03■□□□□ 0.96
LSM5-204ENST00000409909 STRNO43815 780 aa21.02■□□□□ 0.96
LSM5-204ENST00000409909 FARP2O94887 1054 aaPredicted RBP21.02■□□□□ 0.96
LSM5-204ENST00000409909 FGRP09769 529 aa21.02■□□□□ 0.96
LSM5-204ENST00000409909 LRRC47Q8N1G4 583 aaKnown RBP21.02■□□□□ 0.96
LSM5-204ENST00000409909 REPS2Q8NFH8 660 aa21.02■□□□□ 0.96
LSM5-204ENST00000409909 MROH8Q9H579 483 aa21.02■□□□□ 0.96
LSM5-204ENST00000409909 IL17RBQ9NRM6 502 aa21.02■□□□□ 0.96
LSM5-204ENST00000409909 SYNPO2Q9UMS6 1093 aa21.02■□□□□ 0.96
LSM5-204ENST00000409909 NMT2O60551 498 aa21.01■□□□□ 0.95
LSM5-204ENST00000409909 IGHA2P01877 340 aa21.01■□□□□ 0.95
LSM5-204ENST00000409909 ADORA2AP29274 412 aa21.01■□□□□ 0.95
LSM5-204ENST00000409909 NCAPG2Q86XI2 1143 aa21.01■□□□□ 0.95
LSM5-204ENST00000409909 GMCL1P1Q8NEA9 526 aa21.01■□□□□ 0.95
LSM5-204ENST00000409909 SLF1Q9BQI6 1058 aa21.01■□□□□ 0.95
LSM5-204ENST00000409909 ZNF214Q9UL59 606 aaPredicted RBP21.01■□□□□ 0.95
LSM5-204ENST00000409909 ORC4O43929 436 aa21■□□□□ 0.95
LSM5-204ENST00000409909 RANBP6O60518 1105 aaKnown RBP21■□□□□ 0.95
LSM5-204ENST00000409909 COBLO75128 1261 aa21■□□□□ 0.95
LSM5-204ENST00000409909 CAPN2P17655 700 aa21■□□□□ 0.95
LSM5-204ENST00000409909 CCND3P30281 292 aaPredicted RBP21■□□□□ 0.95
LSM5-204ENST00000409909 CWC27Q6UX04 472 aaKnown RBP21■□□□□ 0.95
LSM5-204ENST00000409909 NBPF3Q9H094 633 aa21■□□□□ 0.95
LSM5-204ENST00000409909 ZMYM6O95789 1325 aa21■□□□□ 0.95
LSM5-204ENST00000409909 ZNF236Q9UL36 1845 aa20.99■□□□□ 0.95
LSM5-204ENST00000409909 TSPY2A6NKD2 308 aa20.99■□□□□ 0.95
LSM5-204ENST00000409909 SLC25A27O95847 323 aa20.99■□□□□ 0.95
LSM5-204ENST00000409909 STAT3P40763 770 aa20.99■□□□□ 0.95
LSM5-204ENST00000409909 SLFN13Q68D06 897 aa20.99■□□□□ 0.95
LSM5-204ENST00000409909 DPP9Q86TI2 863 aa20.99■□□□□ 0.95
LSM5-204ENST00000409909 RIOX2Q8IUF8 465 aa20.99■□□□□ 0.95
LSM5-204ENST00000409909 PRPF38AQ8NAV1 312 aaKnown RBP20.99■□□□□ 0.95
LSM5-204ENST00000409909 ZNFX1Q9P2E3 1918 aaKnown RBP20.98■□□□□ 0.95
LSM5-204ENST00000409909 MNX1P50219 401 aaPredicted RBP20.98■□□□□ 0.95
LSM5-204ENST00000409909 HAND2P61296 217 aa20.98■□□□□ 0.95
LSM5-204ENST00000409909 MFSD14CQ5VZR4 134 aa20.98■□□□□ 0.95
LSM5-204ENST00000409909 ABRAQ8N0Z2 381 aa20.98■□□□□ 0.95
LSM5-204ENST00000409909 DIS3LQ8TF46 1054 aaKnown RBP20.98■□□□□ 0.95
LSM5-204ENST00000409909 DIAPH3Q9NSV4 1193 aa20.98■□□□□ 0.95
LSM5-204ENST00000409909 OGDHLQ9ULD0 1010 aa20.98■□□□□ 0.95
LSM5-204ENST00000409909 DNAH12Q6ZR08 3092 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 FCER1AP12319 257 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 GSPT1P15170 499 aaKnown RBP20.97■□□□□ 0.95
LSM5-204ENST00000409909 CYP2C19P33261 490 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 NOVP48745 357 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
LSM5-204ENST00000409909 LHX8Q68G74 356 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 CHMP4CQ96CF2 233 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 PAWRQ96IZ0 340 aaKnown RBP20.97■□□□□ 0.95
LSM5-204ENST00000409909 FEM1BQ9UK73 627 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 STX8Q9UNK0 236 aa20.97■□□□□ 0.95
LSM5-204ENST00000409909 HIP1O00291 1037 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 BMP3P12645 472 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 RRP12Q5JTH9 1297 aaKnown RBP20.96■□□□□ 0.95
LSM5-204ENST00000409909 TTC22Q5TAA0 569 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 ANKLE1Q8NAG6 615 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 TRPV1Q8NER1 839 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 DPF3Q92784 378 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 KIFC2Q96AC6 838 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms