RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 SUPT20HQ8NEM7 779 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 PRDM10Q9NQV6 1147 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 POLD1P28340 1107 aa22.58■■□□□ 1.21
LIMS2-207ENST00000409808 LMOD1P29536 600 aaPredicted RBP22.58■■□□□ 1.21
LIMS2-207ENST00000409808 UBASH3AP57075 661 aa22.58■■□□□ 1.21
LIMS2-207ENST00000409808 CDC42EP5Q6NZY7 148 aa22.58■■□□□ 1.21
LIMS2-207ENST00000409808 ROBO3Q96MS0 1386 aa22.58■■□□□ 1.2
LIMS2-207ENST00000409808 ECM29Q5VYK3 1845 aa22.58■■□□□ 1.2
LIMS2-207ENST00000409808 IFNAR1P17181 557 aa22.58■■□□□ 1.2
LIMS2-207ENST00000409808 SAFBQ15424 915 aaKnown RBP eCLIP22.58■■□□□ 1.2
LIMS2-207ENST00000409808 KRBA2Q6ZNG9 492 aa22.58■■□□□ 1.2
LIMS2-207ENST00000409808 FANCBQ8NB91 859 aa22.58■■□□□ 1.2
LIMS2-207ENST00000409808 HSD3B7Q9H2F3 369 aa22.58■■□□□ 1.2
LIMS2-207ENST00000409808 KCNH3Q9ULD8 1083 aa22.58■■□□□ 1.2
LIMS2-207ENST00000409808 HHIPL2Q6UWX4 724 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 FCHSD1Q86WN1 690 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 KRI1Q8N9T8 703 aaKnown RBP22.57■■□□□ 1.2
LIMS2-207ENST00000409808 SLC26A6Q9BXS9 759 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 IL17RBQ9NRM6 502 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 SERPINC1P01008 464 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 RBM5P52756 815 aaKnown RBP eCLIP22.57■■□□□ 1.2
LIMS2-207ENST00000409808 RCAN1P53805 252 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 CNNM3Q8NE01 707 aa22.57■■□□□ 1.2
LIMS2-207ENST00000409808 COL4A5P29400 1685 aa22.56■■□□□ 1.2
LIMS2-207ENST00000409808 CACNB3P54284 484 aa22.56■■□□□ 1.2
LIMS2-207ENST00000409808 NAA30Q147X3 362 aaPredicted RBP22.56■■□□□ 1.2
LIMS2-207ENST00000409808 CDK8P49336 464 aa22.56■■□□□ 1.2
LIMS2-207ENST00000409808 RCSD1Q6JBY9 416 aa22.56■■□□□ 1.2
LIMS2-207ENST00000409808 NOSTRINQ8IVI9 506 aa22.56■■□□□ 1.2
LIMS2-207ENST00000409808 UPF1Q92900 1129 aaKnown RBP eCLIP22.56■■□□□ 1.2
LIMS2-207ENST00000409808 TMX1Q9H3N1 280 aa22.56■■□□□ 1.2
LIMS2-207ENST00000409808 PIM2Q9P1W9 311 aa22.56■■□□□ 1.2
LIMS2-207ENST00000409808 RASA1P20936 1047 aa22.55■■□□□ 1.2
LIMS2-207ENST00000409808 GUCY1A2P33402 732 aa22.55■■□□□ 1.2
LIMS2-207ENST00000409808 NFIAQ12857 509 aa22.55■■□□□ 1.2
LIMS2-207ENST00000409808 PNOCQ13519 176 aa22.55■■□□□ 1.2
LIMS2-207ENST00000409808 CATIPQ7Z7H3 387 aa22.55■■□□□ 1.2
LIMS2-207ENST00000409808 TRIM22Q8IYM9 498 aa22.55■■□□□ 1.2
LIMS2-207ENST00000409808 FOXP1Q9H334 677 aaPredicted RBP22.55■■□□□ 1.2
LIMS2-207ENST00000409808 UTRNP46939 3433 aa22.55■■□□□ 1.2
LIMS2-207ENST00000409808 CCDC196A0A1B0GTZ2 297 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 RAD17O75943 681 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 TGFB2P61812 414 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 GABPB1Q06547 395 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-207ENST00000409808 METTL16Q86W50 562 aaKnown RBP22.54■■□□□ 1.2
LIMS2-207ENST00000409808 VSTM4Q8IW00 320 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 ZNF444Q8N0Y2 327 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-207ENST00000409808 LARGE2Q8N3Y3 721 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 PSMD1Q99460 953 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 DACH1Q9UI36 760 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 TROAPQ12815 778 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 LONRF3Q496Y0 759 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 RILPL1Q5EBL4 403 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 C16orf86Q6ZW13 317 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 ZNF579Q8NAF0 562 aaKnown RBP22.54■■□□□ 1.2
LIMS2-207ENST00000409808 PHLPP2Q6ZVD8 1323 aa22.54■■□□□ 1.2
LIMS2-207ENST00000409808 KIF20AO95235 890 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 MMP1P03956 469 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 TSPY3P0CV98 308 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 TSPY8P0CW00 308 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 FKBP1AP62942 108 aaKnown RBP22.53■■□□□ 1.2
LIMS2-207ENST00000409808 ZFPM1Q8IX07 1006 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 ZDHHC15Q96MV8 337 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 SLURP2P0DP57 97 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 ATP1A3P13637 1013 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 ETF1P62495 437 aaKnown RBP22.53■■□□□ 1.2
LIMS2-207ENST00000409808 MDM2Q00987 491 aaPredicted RBP22.53■■□□□ 1.2
LIMS2-207ENST00000409808 CFAP100Q494V2 611 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 ISM2Q6H9L7 571 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 CLIC6Q96NY7 704 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 PCDHA5Q9Y5H7 936 aa22.53■■□□□ 1.2
LIMS2-207ENST00000409808 KANK3Q6NY19 840 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 SYT10Q6XYQ8 523 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
LIMS2-207ENST00000409808 PLEKHA8P1O95397 391 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 TOP1P11387 765 aaKnown RBP22.52■■□□□ 1.2
LIMS2-207ENST00000409808 PTPREP23469 700 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 KMT5BQ4FZB7 885 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 NT5DC1Q5TFE4 455 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 TRIML1Q8N9V2 468 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 MLKLQ8NB16 471 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 SRRTQ9BXP5 876 aaKnown RBP22.52■■□□□ 1.2
LIMS2-207ENST00000409808 CEP131Q9UPN4 1083 aa22.52■■□□□ 1.2
LIMS2-207ENST00000409808 hCG_1642624A0A1W2PR95 340 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 ZSCAN12O43309 604 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 DEXIO95424 95 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 PPP2R5BQ15173 497 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 BAZ2BQ9UIF8 2168 aaKnown RBP22.51■■□□□ 1.19
LIMS2-207ENST00000409808 TCP10Q12799 353 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 GRIPAP1Q4V328 841 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 DALRD3Q5D0E6 543 aaKnown RBP22.51■■□□□ 1.19
LIMS2-207ENST00000409808 HOMER1Q86YM7 354 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 SGIP1Q9BQI5 828 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 FAM53CQ9NYF3 392 aa22.51■■□□□ 1.19
LIMS2-207ENST00000409808 PSMD14O00487 310 aa22.5■■□□□ 1.19
LIMS2-207ENST00000409808 CT47A1Q5JQC4 288 aaPredicted RBP22.5■■□□□ 1.19
LIMS2-207ENST00000409808 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
LIMS2-207ENST00000409808 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.5■■□□□ 1.19
LIMS2-207ENST00000409808 ELF2Q15723 593 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms