RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
SUMO1-206ENST00000409368 PAGR1Q9BTK6 254 aa15.37■□□□□ 0.05
SUMO1-206ENST00000409368 PAK6Q9NQU5 681 aaPredicted RBP15.37■□□□□ 0.05
SUMO1-206ENST00000409368 TACC3Q9Y6A5 838 aa15.37■□□□□ 0.05
SUMO1-206ENST00000409368 SLC15A5A6NIM6 579 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 F5H6K3 240 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
SUMO1-206ENST00000409368 SLC34A2O95436 690 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 TTLL1O95922 423 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 HMGCRP04035 888 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 INHAP05111 366 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 CCL5P13501 91 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 GSPT1P15170 499 aaKnown RBP15.36■□□□□ 0.05
SUMO1-206ENST00000409368 EN2P19622 333 aaPredicted RBP15.36■□□□□ 0.05
SUMO1-206ENST00000409368 GJA8P48165 433 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 KLRC3Q07444 240 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 UBE2Q1Q7Z7E8 422 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 SPICE1Q8N0Z3 855 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 REPS2Q8NFH8 660 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 SHISA4Q96DD7 197 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 TANGO6Q9C0B7 1094 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 SPATC1LQ9H0A9 340 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 PPP1R9AQ9ULJ8 1098 aa15.36■□□□□ 0.05
SUMO1-206ENST00000409368 ZNFX1Q9P2E3 1918 aaKnown RBP15.36■□□□□ 0.05
SUMO1-206ENST00000409368 CEP290O15078 2479 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 STRNO43815 780 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 FLOT1O75955 427 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 NDUFB10O96000 172 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 TSPY3P0CV98 308 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 TSPY8P0CW00 308 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 ELNP15502 786 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 PTPREP23469 700 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 TFAP4Q01664 338 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 GRB14Q14449 540 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 ABRAQ8N0Z2 381 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
SUMO1-206ENST00000409368 TCP11L1Q9NUJ3 509 aa15.35■□□□□ 0.05
SUMO1-206ENST00000409368 ATP2A1O14983 1001 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 RGS2P41220 211 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 CTDSPL2Q05D32 466 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 MAP2K5Q13163 448 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 TRIB2Q92519 343 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 ATG4CQ96DT6 458 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 APBA2Q99767 749 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 DSCC1Q9BVC3 393 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 CRISPLD2Q9H0B8 497 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 UNC93B1Q9H1C4 597 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 MROH8Q9H579 483 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 IL17RBQ9NRM6 502 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 DIAPH3Q9NSV4 1193 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
SUMO1-206ENST00000409368 VWA5AO00534 786 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 PLA2G6O60733 806 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 SLC25A27O95847 323 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 ATP2B2Q01814 1243 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 FAM47AQ5JRC9 791 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
SUMO1-206ENST00000409368 RIOX2Q8IUF8 465 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 STK11IPQ8N1F8 1099 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 STAG1Q8WVM7 1258 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 GMCL1Q96IK5 515 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 RNF208Q9H0X6 261 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 FBXO28Q9NVF7 368 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 ZNF214Q9UL59 606 aaPredicted RBP15.33■□□□□ 0.04
SUMO1-206ENST00000409368 RAD50Q92878 1312 aa15.33■□□□□ 0.04
SUMO1-206ENST00000409368 SGPL1O95470 568 aa15.32■□□□□ 0.04
SUMO1-206ENST00000409368 COPB2P35606 906 aa15.32■□□□□ 0.04
SUMO1-206ENST00000409368 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
SUMO1-206ENST00000409368 AKNAD1Q5T1N1 836 aa15.32■□□□□ 0.04
SUMO1-206ENST00000409368 CWC27Q6UX04 472 aaKnown RBP15.32■□□□□ 0.04
SUMO1-206ENST00000409368 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
SUMO1-206ENST00000409368 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-206ENST00000409368 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
SUMO1-206ENST00000409368 SLF1Q9BQI6 1058 aa15.32■□□□□ 0.04
SUMO1-206ENST00000409368 INCENPQ9NQS7 918 aa15.32■□□□□ 0.04
SUMO1-206ENST00000409368 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-206ENST00000409368 RPTORQ8N122 1335 aa15.32■□□□□ 0.04
SUMO1-206ENST00000409368 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
SUMO1-206ENST00000409368 FDX1P10109 184 aa15.31■□□□□ 0.04
SUMO1-206ENST00000409368 ERCC3P19447 782 aa15.31■□□□□ 0.04
SUMO1-206ENST00000409368 CCAR1Q8IX12 1150 aaKnown RBP15.31■□□□□ 0.04
SUMO1-206ENST00000409368 FEM1BQ9UK73 627 aa15.31■□□□□ 0.04
SUMO1-206ENST00000409368 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
SUMO1-206ENST00000409368 CYP2B6P20813 491 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 OAZ1P54368 228 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 OLFML2BQ68BL8 750 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 TBC1D10CQ8IV04 446 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 TTC14Q96N46 770 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.3■□□□□ 0.041e-6■■□□□ 11.5
SUMO1-206ENST00000409368 IL25Q9H293 177 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 RNF41Q9H4P4 317 aaPredicted RBP15.3■□□□□ 0.04
SUMO1-206ENST00000409368 SLC38A10Q9HBR0 1119 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 IVNS1ABPQ9Y6Y0 642 aa15.3■□□□□ 0.04
SUMO1-206ENST00000409368 FRMPD3Q5JV73 1810 aa15.29■□□□□ 0.04
SUMO1-206ENST00000409368 RANBP6O60518 1105 aaKnown RBP15.29■□□□□ 0.04
SUMO1-206ENST00000409368 BMP3P12645 472 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms