RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC10A5Q5PT55 438 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 TOGARAM2Q6ZUX3 1019 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 OTUD6BQ8N6M0 293 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 NSUN7Q8NE18 718 aaKnown RBP11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 TCP11Q8WWU5 503 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 DPF2Q92785 391 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 KAT14Q9H8E8 782 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 ACTR5Q9H9F9 607 aaPredicted RBP11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 ATP6V0A4Q9HBG4 840 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 ZNF277Q9NRM2 450 aaPredicted RBP11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 GRIN2DO15399 1336 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 SH3TC1Q8TE82 1336 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 OPA1O60313 960 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ZNF18P17022 549 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 SCP2P22307 547 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 IFFO1Q0D2I5 559 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 SLMAPQ14BN4 828 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 TLDC1Q6P9B6 456 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ZNF662Q6ZS27 426 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 IQCA1Q86XH1 822 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ARMC2Q8NEN0 867 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 BCAS4Q8TDM0 211 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 TATDN2Q93075 761 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ITFG2Q969R8 447 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 SH3GL3Q99963 347 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 VCPKMTQ9H867 229 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 HOMER3Q9NSC5 361 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 INTS13Q9NVM9 706 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 CLEC11AQ9Y240 323 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 GOLGA6CA6NDK9 693 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 GOLGA6DP0CG33 693 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 NEFHP12036 1026 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 SLC8A1P32418 973 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ACTN3Q08043 901 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 RIC3Q7Z5B4 369 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 ENOX1Q8TC92 643 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 PSMD1Q99460 953 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 MYD88Q99836 296 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 MRPL44Q9H9J2 332 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 KLC4Q9NSK0 619 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 GOLGA6AQ9NYA3 693 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 IQSEC3Q9UPP2 1182 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 HPSEQ9Y251 543 aa11.97□□□□□ -0.49
NIF3L1-204ENST00000409357 LRRC37AA6NMS7 1700 aa11.96□□□□□ -0.49
NIF3L1-204ENST00000409357 WDR90Q96KV7 1748 aa11.96□□□□□ -0.49
NIF3L1-204ENST00000409357 ANKRD65E5RJM6 399 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 SOGA3Q5TF21 947 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 N4BP2L2Q92802 583 aaPredicted RBP11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 ZNF274Q96GC6 653 aaPredicted RBP11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 CRAMP1Q96RY5 1269 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 CRACR2AQ9BSW2 395 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 SUGCTQ9HAC7 445 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 RRAGCQ9HB90 399 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 DACH1Q9UI36 760 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.5
NIF3L1-204ENST00000409357 ANKRD18BA2A2Z9 1011 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 PI4KAP2A4QPH2 592 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 GLTPD2A6NH11 291 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 AKR1B15C9JRZ8 316 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 AGPSO00116 658 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 SPTLC2O15270 562 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 RWDD2BP57060 319 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 APBA1Q02410 837 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 ITIH3Q06033 890 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 NR1I3Q14994 352 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 ALS2CLQ60I27 953 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 PI4KAP1Q8N8J0 262 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 P3H4Q92791 437 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 RBM17Q96I25 401 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 PUF60Q9UHX1 559 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 MYO6Q9UM54 1294 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 DUOX1Q9NRD9 1551 aa11.95□□□□□ -0.5
NIF3L1-204ENST00000409357 A0A1B0GVL5 298 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 POTECB2RU33 542 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 STK25O00506 426 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 PPP6R2O75170 966 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 TAF5LO75529 589 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 IGKV5-2P06315 115 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 EZRP15311 586 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 CKAP4Q07065 602 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 TRIM28Q13263 835 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 NMIQ13287 307 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 FAM177A1Q8N128 213 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 TRIML1Q8N9V2 468 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 MLKLQ8NB16 471 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 ITIH6Q6UXX5 1313 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms