RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 BMP3P12645 472 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 SLC1A4P43007 532 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 USP17L24Q0WX57 530 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 KCTD1Q719H9 257 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 RAB11FIP4Q86YS3 637 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 ZNF654Q8IZM8 581 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 BRF1Q92994 677 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 ASCC2Q9H1I8 757 aaPredicted RBP17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
SNRNP27-202ENST00000409116 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.43
SNRNP27-202ENST00000409116 CYP2C8P10632 490 aa17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 HOXA7P31268 230 aaPredicted RBP17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 NEK4P51957 841 aa17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 IRX3P78415 501 aaPredicted RBP17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 APOBRQ0VD83 1088 aa17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 PABPC4Q13310 644 aaKnown RBP eCLIP17.71■□□□□ 0.422e-6■■□□□ 11.4
SNRNP27-202ENST00000409116 TOB2Q14106 344 aaPredicted RBP17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 SGMS1Q86VZ5 419 aa17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 TMTC2Q8N394 836 aa17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 GPCPD1Q9NPB8 672 aa17.71■□□□□ 0.42
SNRNP27-202ENST00000409116 KLF18A0A0U1RQI7 1052 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 GOLGA8HP0CJ92 632 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 RXRAP19793 462 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 ZNF543Q08ER8 600 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 TROAPQ12815 778 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 TAF1CQ15572 869 aaPredicted RBP17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 APOA5Q6Q788 366 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 CATSPERGQ6ZRH7 1159 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 NUP133Q8WUM0 1156 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 AGXT2Q9BYV1 514 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 ZCCHC17Q9NP64 241 aaKnown RBP17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 NAP1L2Q9ULW6 460 aaPredicted RBP17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
SNRNP27-202ENST00000409116 TMEM232C9JQI7 657 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 TRPA1O75762 1119 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 FLOT1O75955 427 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 OSBPP22059 807 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 IKQ13123 557 aaPredicted RBP17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 CRHR2Q13324 411 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 TTBK2Q6IQ55 1244 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 MICU3Q86XE3 530 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 CCDC144CPQ8IYA2 1237 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 PARK7Q99497 189 aaKnown RBP17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 P2RX7Q99572 595 aaKnown RBP17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 R3HDMLQ9H3Y0 253 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 RNF186Q9NXI6 227 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 PNMA3Q9UL41 463 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 SLC12A7Q9Y666 1083 aa17.69■□□□□ 0.42
SNRNP27-202ENST00000409116 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 DDAH1O94760 285 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 SLC16A2P36021 539 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 AK2P54819 239 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 HERVK_113P62684 666 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 MAP2K1Q02750 393 aaPredicted RBP17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 GRM4Q14833 912 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 NOL8Q76FK4 1167 aaKnown RBP17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 FBXL16Q8N461 479 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 CPVLQ9H3G5 476 aa17.68■□□□□ 0.42
SNRNP27-202ENST00000409116 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 ZBTB43O43298 467 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 TBC1D8O95759 1140 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 ALDH1A1P00352 501 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 PARP1P09874 1014 aaKnown RBP17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 COG2Q14746 738 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 RABEP1Q15276 862 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 ASPRV1Q53RT3 343 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 STAG2Q8N3U4 1231 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 SMCR8Q8TEV9 937 aaPredicted RBP17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 KIFC2Q96AC6 838 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 ATG4CQ96DT6 458 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 WBP1LQ9NX94 342 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 MAD2L2Q9UI95 211 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 FEM1BQ9UK73 627 aa17.67■□□□□ 0.42
SNRNP27-202ENST00000409116 ADGRA2Q96PE1 1338 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 CA12O43570 354 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 PEX10O60683 326 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 STAT2P52630 851 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 GPATCH4Q5T3I0 446 aaKnown RBP17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 POTEEQ6S8J3 1075 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 SLF1Q9BQI6 1058 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 UBA5Q9GZZ9 404 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 ALDH8A1Q9H2A2 487 aaPredicted RBP17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 ZFYVE28Q9HCC9 887 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 TSKSQ9UJT2 592 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 PPP1R9AQ9ULJ8 1098 aa17.66■□□□□ 0.42
SNRNP27-202ENST00000409116 RLFQ13129 1914 aa17.65■□□□□ 0.42
SNRNP27-202ENST00000409116 PALM3A6NDB9 673 aaPredicted RBP17.65■□□□□ 0.42
SNRNP27-202ENST00000409116 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
SNRNP27-202ENST00000409116 CALM1P0DP23 149 aa17.65■□□□□ 0.42
SNRNP27-202ENST00000409116 CALM2P0DP24 149 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms