RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 STAT3P40763 770 aa15.26■□□□□ 0.03
SNORD88B-201ENST00000408454 SHROOM1Q2M3G4 852 aaPredicted RBP15.26■□□□□ 0.03
SNORD88B-201ENST00000408454 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
SNORD88B-201ENST00000408454 SPICE1Q8N0Z3 855 aa15.26■□□□□ 0.03
SNORD88B-201ENST00000408454 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
SNORD88B-201ENST00000408454 OSBP2Q969R2 916 aa15.26■□□□□ 0.03
SNORD88B-201ENST00000408454 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 TSPY2A6NKD2 308 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 VWA5AO00534 786 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 SEPT4O43236 478 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 CNMDO75829 334 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 RASA1P20936 1047 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 ZMYM1Q5SVZ6 1142 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 MKL1Q969V6 931 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 ATG4CQ96DT6 458 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 DDX11Q96FC9 970 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 LBHD1Q9BQE6 289 aaPredicted RBP15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 SPC25Q9HBM1 224 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 STAP2Q9UGK3 403 aa15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 ISY1Q9ULR0 285 aaKnown RBP15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
SNORD88B-201ENST00000408454 F5H6K3 240 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 ATP2A1O14983 1001 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 STAT2P52630 851 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 KLRC3Q07444 240 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 PPARAQ07869 468 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 IKQ13123 557 aaPredicted RBP15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 CCDC178Q5BJE1 867 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 RCSD1Q6JBY9 416 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 PI4K2BQ8TCG2 481 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 MPHOSPH6Q99547 160 aaKnown RBP15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 RNF41Q9H4P4 317 aaPredicted RBP15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 CLIP2Q9UDT6 1046 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 ADAMTS5Q9UNA0 930 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
SNORD88B-201ENST00000408454 ZMYM6O95789 1325 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 CYP2D7A0A087X1C5 515 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 RARBP10826 455 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 BMP8BP34820 402 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 TKFCQ3LXA3 575 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 FAM83BQ5T0W9 1011 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 RNF180Q86T96 592 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 MTMR4Q9NYA4 1195 aa15.23■□□□□ 0.03
SNORD88B-201ENST00000408454 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 BMP3P12645 472 aa15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 PDE1AP54750 535 aa15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 MCMDC2Q4G0Z9 681 aa15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 ZNF467Q7Z7K2 595 aaPredicted RBP15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 C7orf61Q8IZ16 206 aa15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 GMCL1Q96IK5 515 aa15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 A0A0G2JMZ2 1700 aa15.22■□□□□ 0.03
SNORD88B-201ENST00000408454 TNRC18O15417 2968 aaPredicted RBP15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 SYNGAP1Q96PV0 1343 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 PLA2G6O60733 806 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 NDUFB10O96000 172 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 CYBAP13498 195 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 AKR1A1P14550 325 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 CCND3P30281 292 aaPredicted RBP15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 SLC1A4P43007 532 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 TFAP4Q01664 338 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 ALX1Q15699 326 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 CCL14Q16627 93 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 SNRNP48Q6IEG0 339 aaKnown RBP15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 GPR153Q6NV75 609 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 CEP95Q96GE4 821 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 MAML3Q96JK9 1138 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 CRBNQ96SW2 442 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 ANAPC4Q9UJX5 808 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 STX8Q9UNK0 236 aa15.21■□□□□ 0.03
SNORD88B-201ENST00000408454 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.02
SNORD88B-201ENST00000408454 HTTP42858 3142 aa15.21■□□□□ 0.02
SNORD88B-201ENST00000408454 PFASO15067 1338 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 B4DLN1 442 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 M0R2C6 588 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 CYP2C19P33261 490 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 MRPL12P52815 198 aaKnown RBP15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 TRIM32Q13049 653 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 SLFN13Q68D06 897 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 LHX8Q68G74 356 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 SIAH1Q8IUQ4 282 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 ANKRD35Q8N283 1001 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 TINF2Q9BSI4 451 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 TOMM22Q9NS69 142 aa15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 ZNF214Q9UL59 606 aaPredicted RBP15.2■□□□□ 0.02
SNORD88B-201ENST00000408454 ORC4O43929 436 aa15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 COL6A1P12109 1028 aa15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 TSHZ3Q63HK5 1081 aa15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 NUP133Q8WUM0 1156 aa15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 KIFC2Q96AC6 838 aa15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 DIAPH3Q9NSV4 1193 aa15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
SNORD88B-201ENST00000408454 PLXNB2O15031 1838 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms