RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 SF3B3Q15393 1217 aaKnown RBP20.88■□□□□ 0.93
EWSR1-207ENST00000406548 IL17AQ16552 155 aa20.88■□□□□ 0.93
EWSR1-207ENST00000406548 PFKFB3Q16875 520 aaPredicted RBP20.88■□□□□ 0.93
EWSR1-207ENST00000406548 NSUN4Q96CB9 384 aaKnown RBP20.88■□□□□ 0.93
EWSR1-207ENST00000406548 MINPP1Q9UNW1 487 aa20.88■□□□□ 0.93
EWSR1-207ENST00000406548 COBLO75128 1261 aa20.88■□□□□ 0.93
EWSR1-207ENST00000406548 MTRQ99707 1265 aa20.88■□□□□ 0.93
EWSR1-207ENST00000406548 CDC23Q9UJX2 597 aa20.88■□□□□ 0.93
EWSR1-207ENST00000406548 TTF2Q9UNY4 1162 aaKnown RBP20.88■□□□□ 0.93
EWSR1-207ENST00000406548 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
EWSR1-207ENST00000406548 LRRC10BA6NIK2 292 aa20.87■□□□□ 0.93
EWSR1-207ENST00000406548 N4BP3O15049 544 aa20.87■□□□□ 0.93
EWSR1-207ENST00000406548 CYP2C19P33261 490 aa20.87■□□□□ 0.93
EWSR1-207ENST00000406548 FAM47AQ5JRC9 791 aa20.87■□□□□ 0.93
EWSR1-207ENST00000406548 ZNF569Q5MCW4 686 aa20.87■□□□□ 0.93
EWSR1-207ENST00000406548 TMTC1Q8IUR5 882 aa20.87■□□□□ 0.93
EWSR1-207ENST00000406548 CDCA7Q9BWT1 371 aaPredicted RBP20.87■□□□□ 0.93
EWSR1-207ENST00000406548 DCP1AQ9NPI6 582 aaPredicted RBP20.87■□□□□ 0.93
EWSR1-207ENST00000406548 ERICH4A6NGS2 130 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 COPB1P53618 953 aaKnown RBP20.86■□□□□ 0.93
EWSR1-207ENST00000406548 DDB1Q16531 1140 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 ZNF658Q5TYW1 1059 aaPredicted RBP20.86■□□□□ 0.93
EWSR1-207ENST00000406548 CEP112Q8N8E3 955 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 ANKRD20A12PQ8NF67 263 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 CRNKL1Q9BZJ0 848 aaKnown RBP20.86■□□□□ 0.93
EWSR1-207ENST00000406548 ABHD10Q9NUJ1 306 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 RMND1Q9NWS8 449 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 BAZ2BQ9UIF8 2168 aaKnown RBP20.86■□□□□ 0.93
EWSR1-207ENST00000406548 MAST2Q6P0Q8 1798 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 MECOMQ03112 1051 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 TRIM14Q14142 442 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 ACRBPQ8NEB7 543 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 NELFBQ8WX92 580 aa20.86■□□□□ 0.93
EWSR1-207ENST00000406548 CCDC151A5D8V7 595 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 ERVK-24P63145 666 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 TUBB2AQ13885 445 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 ARL6IP4Q66PJ3 421 aaKnown RBP20.85■□□□□ 0.93
EWSR1-207ENST00000406548 TUBB2BQ9BVA1 445 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 VPS16Q9H269 839 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 ZSWIM4Q9H7M6 989 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 TAB2Q9NYJ8 693 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 COL5A3P25940 1745 aaPredicted RBP20.85■□□□□ 0.93
EWSR1-207ENST00000406548 KCNJ18B7U540 433 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 ADAMTS3O15072 1205 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 POLR3GO15318 223 aaPredicted RBP20.85■□□□□ 0.93
EWSR1-207ENST00000406548 OAS2P29728 719 aaKnown RBP20.85■□□□□ 0.93
EWSR1-207ENST00000406548 KCNJ12Q14500 433 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 BRD3Q15059 726 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 TCP11X2Q5H9J9 407 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 FBXO33Q7Z6M2 555 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 FUT8Q9BYC5 575 aa20.85■□□□□ 0.93
EWSR1-207ENST00000406548 ARPP21Q9UBL0 812 aaPredicted RBP20.85■□□□□ 0.93
EWSR1-207ENST00000406548 CTAGE9A4FU28 777 aa20.84■□□□□ 0.93
EWSR1-207ENST00000406548 RPN1P04843 607 aaKnown RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 VEGFAP15692 232 aaPredicted RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 LONP1P36776 959 aaKnown RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 SMC1AQ14683 1233 aaKnown RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 KIF4BQ2VIQ3 1234 aa20.84■□□□□ 0.93
EWSR1-207ENST00000406548 SLC35F6Q8N357 371 aa20.84■□□□□ 0.93
EWSR1-207ENST00000406548 CELF1Q92879 486 aaKnown RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 NUP88Q99567 741 aaPredicted RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 ATP8A2Q9NTI2 1148 aa20.84■□□□□ 0.93
EWSR1-207ENST00000406548 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 PUF60Q9UHX1 559 aaKnown RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 PDS5AQ29RF7 1337 aaKnown RBP20.84■□□□□ 0.93
EWSR1-207ENST00000406548 CYP2D6P10635 497 aa20.84■□□□□ 0.93
EWSR1-207ENST00000406548 CALML3P27482 149 aa20.84■□□□□ 0.93
EWSR1-207ENST00000406548 CYP26C1Q6V0L0 522 aa20.84■□□□□ 0.93
EWSR1-207ENST00000406548 TSPY2A6NKD2 308 aa20.83■□□□□ 0.93
EWSR1-207ENST00000406548 KLRK1P26718 216 aa20.83■□□□□ 0.93
EWSR1-207ENST00000406548 CDC25AP30304 524 aa20.83■□□□□ 0.93
EWSR1-207ENST00000406548 KIF5BP33176 963 aa20.83■□□□□ 0.93
EWSR1-207ENST00000406548 LONRF2Q1L5Z9 754 aa20.83■□□□□ 0.93
EWSR1-207ENST00000406548 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 STAT6P42226 847 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 SBK1Q52WX2 424 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 BLIDQ8IZY5 108 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 C4orf32Q8N8J7 132 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 ANKZF1Q9H8Y5 726 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 GDAQ9Y2T3 454 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 RNF225M0QZC1 329 aaPredicted RBP20.82■□□□□ 0.92
EWSR1-207ENST00000406548 TOM1O60784 492 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 RCSD1Q6JBY9 416 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
EWSR1-207ENST00000406548 NAPGQ99747 312 aaPredicted RBP20.82■□□□□ 0.92
EWSR1-207ENST00000406548 SPATA31A1Q5TZJ5 1347 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 FAM205AQ6ZU69 1335 aa20.82■□□□□ 0.92
EWSR1-207ENST00000406548 MYO1AQ9UBC5 1043 aa20.81■□□□□ 0.92
EWSR1-207ENST00000406548 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
EWSR1-207ENST00000406548 ARHGAP25P42331 645 aa20.81■□□□□ 0.92
EWSR1-207ENST00000406548 PRCPP42785 496 aa20.81■□□□□ 0.92
EWSR1-207ENST00000406548 MSANTD4Q8NCY6 345 aa20.81■□□□□ 0.92
EWSR1-207ENST00000406548 SH3GLB2Q9NR46 395 aa20.81■□□□□ 0.92
EWSR1-207ENST00000406548 PCDHA4Q9UN74 947 aa20.81■□□□□ 0.92
EWSR1-207ENST00000406548 PRDX5P30044 214 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 KRT9P35527 623 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 TUBB4BP68371 445 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 WWC2Q6AWC2 1192 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms