RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 SLURP2P0DP57 97 aa33.25■■■□□ 2.91
CSNK1E-205ENST00000405675 PTPREP23469 700 aa33.25■■■□□ 2.91
CSNK1E-205ENST00000405675 SYKP43405 635 aa33.25■■■□□ 2.91
CSNK1E-205ENST00000405675 STX1AQ16623 288 aa33.25■■■□□ 2.91
CSNK1E-205ENST00000405675 CPVLQ9H3G5 476 aa33.25■■■□□ 2.91
CSNK1E-205ENST00000405675 ZNF165P49910 485 aa33.24■■■□□ 2.91
CSNK1E-205ENST00000405675 TCP10Q12799 353 aa33.24■■■□□ 2.91
CSNK1E-205ENST00000405675 SPECC1Q5M775 1068 aa33.24■■■□□ 2.91
CSNK1E-205ENST00000405675 FAM198AQ9UFP1 575 aa33.24■■■□□ 2.91
CSNK1E-205ENST00000405675 SHMT1P34896 483 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 TYW1BQ6NUM6 668 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 OGFOD1Q8N543 542 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 AGBL3Q8NEM8 1001 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 IDI2Q9BXS1 227 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 HDAC9Q9UKV0 1011 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 ARFGEF1Q9Y6D6 1849 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 TRIM75PA6NK02 468 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 USP17L2Q6R6M4 530 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 CLEC10AQ8IUN9 316 aa33.23■■■□□ 2.91
CSNK1E-205ENST00000405675 IGKV6D-41A0A0C4DH26 115 aa33.22■■■□□ 2.91
CSNK1E-205ENST00000405675 KLRF2D3W0D1 207 aa33.22■■■□□ 2.91
CSNK1E-205ENST00000405675 PLCB2Q00722 1185 aa33.22■■■□□ 2.91
CSNK1E-205ENST00000405675 MTMR4Q9NYA4 1195 aa33.22■■■□□ 2.91
CSNK1E-205ENST00000405675 HS1BP3Q53T59 392 aa33.22■■■□□ 2.91
CSNK1E-205ENST00000405675 KIAA1468Q9P260 1216 aa33.22■■■□□ 2.91
CSNK1E-205ENST00000405675 TIGD1Q96MW7 591 aa33.21■■■□□ 2.91
CSNK1E-205ENST00000405675 SWAP70Q9UH65 585 aa33.21■■■□□ 2.91
CSNK1E-205ENST00000405675 CEP131Q9UPN4 1083 aa33.21■■■□□ 2.91
CSNK1E-205ENST00000405675 SPDYE2BA6NHP3 402 aa33.2■■■□□ 2.91
CSNK1E-205ENST00000405675 PARP1P09874 1014 aaKnown RBP33.2■■■□□ 2.91
CSNK1E-205ENST00000405675 SPDYE6P0CI01 402 aa33.2■■■□□ 2.91
CSNK1E-205ENST00000405675 WWC2Q6AWC2 1192 aa33.2■■■□□ 2.91
CSNK1E-205ENST00000405675 LZTS2Q9BRK4 669 aa33.2■■■□□ 2.91
CSNK1E-205ENST00000405675 SH3GLB2Q9NR46 395 aa33.2■■■□□ 2.91
CSNK1E-205ENST00000405675 KCNH3Q9ULD8 1083 aa33.2■■■□□ 2.9
CSNK1E-205ENST00000405675 SRPRBQ9Y5M8 271 aaKnown RBP33.2■■■□□ 2.9
CSNK1E-205ENST00000405675 USP17L5A8MUK1 530 aa33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 DLGAP5Q15398 846 aa33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 HLA-DOAP06340 250 aa33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 EIF6P56537 245 aaKnown RBP33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 TNIP1Q15025 636 aa33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 IQCB1Q15051 598 aa33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 PIK3AP1Q6ZUJ8 805 aa33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 ANO10Q9NW15 660 aa33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 NOL7Q9UMY1 257 aaKnown RBP33.19■■■□□ 2.9
CSNK1E-205ENST00000405675 UTRNP46939 3433 aa33.18■■■□□ 2.9
CSNK1E-205ENST00000405675 CAVIN2O95810 425 aa33.18■■■□□ 2.9
CSNK1E-205ENST00000405675 LRRC47Q8N1G4 583 aaKnown RBP33.18■■■□□ 2.9
CSNK1E-205ENST00000405675 SPZ1Q9BXG8 430 aa33.18■■■□□ 2.9
CSNK1E-205ENST00000405675 ZNF174Q15697 407 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 ARHGAP27Q6ZUM4 889 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 DNAJC18Q9H819 358 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 DDTLA6NHG4 134 aaPredicted RBP33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 LONRF3Q496Y0 759 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 TTC38Q5R3I4 469 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 SH3BP5LQ7L8J4 393 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 HEATR3Q7Z4Q2 680 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 BLIDQ8IZY5 108 aa33.17■■■□□ 2.9
CSNK1E-205ENST00000405675 MYH8P13535 1937 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 SHTN1A0MZ66 631 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 STXBP3O00186 592 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 CALML3P27482 149 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 ZNF579Q8NAF0 562 aaKnown RBP33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 SYT17Q9BSW7 474 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 EHD4Q9H223 541 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 CCDC39Q9UFE4 941 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 PCDHA4Q9UN74 947 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 MORC2Q9Y6X9 1032 aaPredicted RBP33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 CLRN2A0PK11 232 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 NPM3O75607 178 aaKnown RBP33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 ZSCAN30Q86W11 494 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 CSRNP2Q9H175 543 aa33.16■■■□□ 2.9
CSNK1E-205ENST00000405675 FZD9O00144 591 aa33.15■■■□□ 2.9
CSNK1E-205ENST00000405675 PDHBP11177 359 aa33.15■■■□□ 2.9
CSNK1E-205ENST00000405675 RASGRP4Q8TDF6 673 aa33.15■■■□□ 2.9
CSNK1E-205ENST00000405675 BARHL2Q9NY43 387 aa33.15■■■□□ 2.9
CSNK1E-205ENST00000405675 SIPA1L1O43166 1804 aa33.15■■■□□ 2.9
CSNK1E-205ENST00000405675 USP49Q70CQ1 688 aa33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 ZSCAN29Q8IWY8 852 aaPredicted RBP33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 DHX36Q9H2U1 1008 aaKnown RBP33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 EIF2AK3Q9NZJ5 1116 aaKnown RBP33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 CLIP2Q9UDT6 1046 aa33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 SRCAPQ6ZRS2 3230 aa33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 FAM196BA6NMK8 535 aa33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 KRBA2Q6ZNG9 492 aa33.14■■■□□ 2.9
CSNK1E-205ENST00000405675 FRMPD2Q68DX3 1309 aaPredicted RBP33.13■■■□□ 2.89
CSNK1E-205ENST00000405675 BIN1O00499 593 aa33.13■■■□□ 2.89
CSNK1E-205ENST00000405675 UBA5Q9GZZ9 404 aa33.13■■■□□ 2.89
CSNK1E-205ENST00000405675 FAM13BQ9NYF5 915 aa33.13■■■□□ 2.89
CSNK1E-205ENST00000405675 ZNF70Q9UC06 446 aaPredicted RBP33.13■■■□□ 2.89
CSNK1E-205ENST00000405675 M0R2N6 131 aa33.13■■■□□ 2.89
CSNK1E-205ENST00000405675 PTMAP06454 111 aaKnown RBP33.13■■■□□ 2.89
CSNK1E-205ENST00000405675 TCP10L2B9ZVM9 353 aa33.12■■■□□ 2.89
CSNK1E-205ENST00000405675 TTLL1O95922 423 aa33.12■■■□□ 2.89
CSNK1E-205ENST00000405675 DPCR1Q3MIW9 517 aa33.12■■■□□ 2.89
CSNK1E-205ENST00000405675 METTL16Q86W50 562 aaKnown RBP33.12■■■□□ 2.89
CSNK1E-205ENST00000405675 DHX40Q8IX18 779 aaKnown RBP33.12■■■□□ 2.89
CSNK1E-205ENST00000405675 VAT1LQ9HCJ6 419 aa33.12■■■□□ 2.89
CSNK1E-205ENST00000405675 GJA3Q9Y6H8 435 aa33.12■■■□□ 2.89
CSNK1E-205ENST00000405675 MPHOSPH10O00566 681 aaKnown RBP33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms