RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 TMEM179Q6ZVK1 233 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 STAG1Q8WVM7 1258 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 ESR2Q92731 530 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 LBHD1Q9BQE6 289 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-204ENST00000405578 DNAJC18Q9H819 358 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 GJD2Q9UKL4 321 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 MYO5AQ9Y4I1 1855 aaKnown RBP12.44□□□□□ -0.42
RPAIN-204ENST00000405578 TSPY2A6NKD2 308 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 USP17L5A8MUK1 530 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 ORC4O43929 436 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 RANBP6O60518 1105 aaKnown RBP12.44□□□□□ -0.42
RPAIN-204ENST00000405578 PRDM1O75626 825 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 GDF11O95390 407 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 GH2P01242 217 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 TSPY3P0CV98 308 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 TSPY8P0CW00 308 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 CYP2B6P20813 491 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 RRP12Q5JTH9 1297 aaKnown RBP12.44□□□□□ -0.42
RPAIN-204ENST00000405578 MAP3K21Q5TCX8 1036 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
RPAIN-204ENST00000405578 MYLIPQ8WY64 445 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 KRT23Q9C075 422 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 UPF2Q9HAU5 1272 aaKnown RBP12.44□□□□□ -0.42
RPAIN-204ENST00000405578 RAPGEFL1Q9UHV5 662 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 ZBTB21Q9ULJ3 1066 aa12.44□□□□□ -0.42
RPAIN-204ENST00000405578 MYH7P12883 1935 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 RLFQ13129 1914 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 RASA1P20936 1047 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 GCLCP48506 637 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-204ENST00000405578 EVX2Q03828 476 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 KRT32Q14532 448 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 CREB3L3Q68CJ9 461 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
RPAIN-204ENST00000405578 SH2D4AQ9H788 454 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 KANSL2Q9H9L4 492 aa12.43□□□□□ -0.42
RPAIN-204ENST00000405578 SLC27A2O14975 620 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 CYP21A2P08686 494 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 FGRP09769 529 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 AKR1B1P15121 316 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 TFAP4Q01664 338 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 CCDC178Q5BJE1 867 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 TBC1D10CQ8IV04 446 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 PROCA1Q8NCQ7 364 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-204ENST00000405578 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 FEZ1Q99689 392 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 SEMA6BQ9H3T3 888 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 ARHGEF10LQ9HCE6 1279 aa12.42□□□□□ -0.42
RPAIN-204ENST00000405578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPAIN-204ENST00000405578 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
RPAIN-204ENST00000405578 FOSL2P15408 326 aa12.41□□□□□ -0.42
RPAIN-204ENST00000405578 CCND3P30281 292 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-204ENST00000405578 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
RPAIN-204ENST00000405578 ICA1Q05084 483 aa12.41□□□□□ -0.42
RPAIN-204ENST00000405578 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
RPAIN-204ENST00000405578 NEDD1Q8NHV4 660 aa12.41□□□□□ -0.42
RPAIN-204ENST00000405578 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
RPAIN-204ENST00000405578 WDR18Q9BV38 432 aa12.41□□□□□ -0.42
RPAIN-204ENST00000405578 E7EWF7 191 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 PSMA5P28066 241 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 HSPA4P34932 840 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 USP14P54578 494 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 HMGCS2P54868 508 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 CACNB2Q08289 660 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-204ENST00000405578 SPP2Q13103 211 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 RRP1BQ14684 758 aaKnown RBP12.4□□□□□ -0.42
RPAIN-204ENST00000405578 SEPT2Q15019 361 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 FAM47AQ5JRC9 791 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 LHX8Q68G74 356 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 SOCS4Q8WXH5 440 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 UBAC1Q9BSL1 405 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 ASCC2Q9H1I8 757 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-204ENST00000405578 TTYH1Q9H313 450 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-204ENST00000405578 CDH23Q9H251 3354 aa12.4□□□□□ -0.42
RPAIN-204ENST00000405578 ERICH2A1L162 156 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 USP17L10C9JJH3 530 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 TNFRSF10AO00220 468 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 PEX10O60683 326 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 KDM4AO75164 1064 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 TTLL1O95922 423 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
RPAIN-204ENST00000405578 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPAIN-204ENST00000405578 SHHQ15465 462 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 NUDT12Q9BQG2 462 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 INCENPQ9NQS7 918 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 TMOD4Q9NZQ9 345 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 MORF4L1Q9UBU8 362 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 NAV1Q8NEY1 1877 aa12.39□□□□□ -0.43
RPAIN-204ENST00000405578 NEDD4P46934 1319 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 B4E1Z4 1266 aa12.38□□□□□ -0.43
RPAIN-204ENST00000405578 XRCC5P13010 732 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms