RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PDE1AP54750 535 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 AAMPQ13685 434 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 PLS1Q14651 629 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 FAM83BQ5T0W9 1011 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 NECAB2Q7Z6G3 386 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 NPLOC4Q8TAT6 608 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 RAD21O60216 631 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 TMEM132BQ14DG7 1078 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 MFSD14CQ5VZR4 134 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 NAPBQ9H115 298 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 ZNF287Q9HBT7 754 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 ADAMTS5Q9UNA0 930 aa18.33■□□□□ 0.52
TPM1-207ENST00000403994 IGHA2P01877 340 aa18.32■□□□□ 0.52
TPM1-207ENST00000403994 LHX8Q68G74 356 aa18.32■□□□□ 0.52
TPM1-207ENST00000403994 CHRDL2Q6WN34 429 aa18.32■□□□□ 0.52
TPM1-207ENST00000403994 EVI5LQ96CN4 794 aa18.32■□□□□ 0.52
TPM1-207ENST00000403994 NUP88Q99567 741 aaPredicted RBP18.32■□□□□ 0.52
TPM1-207ENST00000403994 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
TPM1-207ENST00000403994 MROH8Q9H579 483 aa18.32■□□□□ 0.52
TPM1-207ENST00000403994 NR2E3Q9Y5X4 410 aa18.32■□□□□ 0.52
TPM1-207ENST00000403994 PFASO15067 1338 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 LAMA4Q16363 1823 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 VWA5AO00534 786 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 STRNO43815 780 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 EVI5O60447 810 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 NDUFB10O96000 172 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 CYBAP13498 195 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 CYP2C19P33261 490 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 PPARAQ07869 468 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 NCAPG2Q86XI2 1143 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 ABRAQ8N0Z2 381 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 CEP95Q96GE4 821 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 LNPKQ9C0E8 428 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
TPM1-207ENST00000403994 LAMA2P24043 3122 aaKnown RBP18.3■□□□□ 0.52
TPM1-207ENST00000403994 PDE4BQ07343 736 aa18.3■□□□□ 0.52
TPM1-207ENST00000403994 OLFML2BQ68BL8 750 aa18.3■□□□□ 0.52
TPM1-207ENST00000403994 DPP9Q86TI2 863 aa18.3■□□□□ 0.52
TPM1-207ENST00000403994 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
TPM1-207ENST00000403994 TRPV1Q8NER1 839 aa18.3■□□□□ 0.52
TPM1-207ENST00000403994 SLF1Q9BQI6 1058 aa18.3■□□□□ 0.52
TPM1-207ENST00000403994 MTMR4Q9NYA4 1195 aa18.3■□□□□ 0.52
TPM1-207ENST00000403994 ZNF214Q9UL59 606 aaPredicted RBP18.3■□□□□ 0.52
TPM1-207ENST00000403994 A0A0D9SFI3 127 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 F5H6K3 240 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 COBLO75128 1261 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 SLC25A27O95847 323 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 FXR1P51114 621 aaKnown RBP eCLIP18.29■□□□□ 0.52
TPM1-207ENST00000403994 KLRC3Q07444 240 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 VPS53Q5VIR6 699 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 RIOX2Q8IUF8 465 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 ZNF444Q8N0Y2 327 aaPredicted RBP18.29■□□□□ 0.52
TPM1-207ENST00000403994 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
TPM1-207ENST00000403994 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 SYNPO2Q9UMS6 1093 aa18.29■□□□□ 0.52
TPM1-207ENST00000403994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
TPM1-207ENST00000403994 TTLL1O95922 423 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
TPM1-207ENST00000403994 TSPY3P0CV98 308 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 TSPY8P0CW00 308 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 COL6A1P12109 1028 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 FCER1AP12319 257 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 FAM47AQ5JRC9 791 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 C7orf61Q8IZ16 206 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 NEDD1Q8NHV4 660 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 PRO3102Q9H379 93 aa18.28■□□□□ 0.52
TPM1-207ENST00000403994 DDX20Q9UHI6 824 aaKnown RBP18.28■□□□□ 0.52
TPM1-207ENST00000403994 GMCL1P1Q8NEA9 526 aa18.27■□□□□ 0.52
TPM1-207ENST00000403994 MKL1Q969V6 931 aa18.27■□□□□ 0.52
TPM1-207ENST00000403994 MAML3Q96JK9 1138 aa18.27■□□□□ 0.52
TPM1-207ENST00000403994 RWDD1Q9H446 243 aaPredicted RBP18.27■□□□□ 0.52
TPM1-207ENST00000403994 HELLSQ9NRZ9 838 aa18.27■□□□□ 0.52
TPM1-207ENST00000403994 SLC5A4Q9NY91 659 aa18.27■□□□□ 0.52
TPM1-207ENST00000403994 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.52
TPM1-207ENST00000403994 MSCO60682 206 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 CNGA1P29973 690 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 COPB2P35606 906 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 STAT3P40763 770 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 CTDSPL2Q05D32 466 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 MMP19Q99542 508 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 TEX13BQ9BXU2 312 aa18.26■□□□□ 0.51
TPM1-207ENST00000403994 ZMYM6O95789 1325 aa18.25■□□□□ 0.51
TPM1-207ENST00000403994 IGHDP01880 384 aa18.25■□□□□ 0.51
TPM1-207ENST00000403994 PGK2P07205 417 aa18.25■□□□□ 0.51
TPM1-207ENST00000403994 TFAP4Q01664 338 aa18.25■□□□□ 0.51
TPM1-207ENST00000403994 SNRNP48Q6IEG0 339 aaKnown RBP18.25■□□□□ 0.51
TPM1-207ENST00000403994 ZNF589Q86UQ0 364 aaPredicted RBP18.25■□□□□ 0.51
TPM1-207ENST00000403994 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
TPM1-207ENST00000403994 TICAM2Q86XR7 235 aa18.25■□□□□ 0.51
TPM1-207ENST00000403994 PRPF38AQ8NAV1 312 aaKnown RBP18.25■□□□□ 0.51
TPM1-207ENST00000403994 ANAPC4Q9UJX5 808 aa18.25■□□□□ 0.51
TPM1-207ENST00000403994 TACC3Q9Y6A5 838 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms