RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 KCTD1Q719H9 257 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 SCYL3Q8IZE3 742 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 GMCL1P1Q8NEA9 526 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 DCAF4Q8WV16 495 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 KLRG1Q96E93 195 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 CDCA5Q96FF9 252 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 UBA5Q9GZZ9 404 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 TMX2Q9Y320 296 aa29.2■■■□□ 2.26
HIST2H3A-201ENST00000403683 F13A1P00488 732 aa29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 SNHG28P0DPA3 235 aa29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 TTLL12Q14166 644 aaPredicted RBP29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 ZYXQ15942 572 aaKnown RBP29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 OTUD7BQ6GQQ9 843 aa29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 FERMT3Q86UX7 667 aa29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 GBP4Q96PP9 640 aa29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 CPVLQ9H3G5 476 aa29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 RBM27Q9P2N5 1060 aaKnown RBP29.19■■■□□ 2.26
HIST2H3A-201ENST00000403683 XBP1P17861 261 aa29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 SYNPO2Q9UMS6 1093 aa29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 USP2O75604 605 aaPredicted RBP29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 NDUFB10O96000 172 aa29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 SPICE1Q8N0Z3 855 aa29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 FBXO18Q8NFZ0 1043 aa29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 GJB4Q9NTQ9 266 aa29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 ATP6V1DQ9Y5K8 247 aa29.18■■■□□ 2.26
HIST2H3A-201ENST00000403683 POTEIP0CG38 1075 aa29.17■■■□□ 2.26
HIST2H3A-201ENST00000403683 POTEJP0CG39 1038 aa29.17■■■□□ 2.26
HIST2H3A-201ENST00000403683 IKQ13123 557 aaPredicted RBP29.17■■■□□ 2.26
HIST2H3A-201ENST00000403683 SSC5DA1L4H1 1573 aa29.17■■■□□ 2.26
HIST2H3A-201ENST00000403683 MAP1SQ66K74 1059 aaPredicted RBP29.16■■■□□ 2.26
HIST2H3A-201ENST00000403683 RRP36Q96EU6 259 aaKnown RBP29.16■■■□□ 2.26
HIST2H3A-201ENST00000403683 SPZ1Q9BXG8 430 aa29.16■■■□□ 2.26
HIST2H3A-201ENST00000403683 IREB2P48200 963 aaKnown RBP29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 TTBK2Q6IQ55 1244 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 HOMER1Q86YM7 354 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 GMCL1Q96IK5 515 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 NUP88Q99567 741 aaPredicted RBP29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 AS3MTQ9HBK9 375 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 SEC63Q9UGP8 760 aaKnown RBP29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 CYTH3O43739 400 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 BMP3P12645 472 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 SMARCA1P28370 1054 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 MAP3K9P80192 1104 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 GNL2Q13823 731 aaKnown RBP29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 PKN1Q16512 942 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 KRT40Q6A162 431 aa29.15■■■□□ 2.26
HIST2H3A-201ENST00000403683 SCG2P13521 617 aa29.14■■■□□ 2.26
HIST2H3A-201ENST00000403683 SLC16A2P36021 539 aa29.14■■■□□ 2.26
HIST2H3A-201ENST00000403683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.14■■■□□ 2.26
HIST2H3A-201ENST00000403683 VCPKMTQ9H867 229 aa29.14■■■□□ 2.26
HIST2H3A-201ENST00000403683 NMRK2Q9NPI5 230 aa29.14■■■□□ 2.26
HIST2H3A-201ENST00000403683 CSADQ9Y600 493 aa29.14■■■□□ 2.26
HIST2H3A-201ENST00000403683 SAFBQ15424 915 aaKnown RBP eCLIP29.13■■■□□ 2.25
HIST2H3A-201ENST00000403683 PFKFB3Q16875 520 aaPredicted RBP29.13■■■□□ 2.25
HIST2H3A-201ENST00000403683 PTPRAP18433 802 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 ZSCAN16Q9H4T2 348 aaPredicted RBP29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 VPS54Q9P1Q0 977 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 ZHX2Q9Y6X8 837 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 TMEM232C9JQI7 657 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 BAG4O95429 457 aaKnown RBP29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 SLC35G1Q2M3R5 365 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 LDHDQ86WU2 507 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 ZNF408Q9H9D4 720 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 KCNJ14Q9UNX9 436 aa29.12■■■□□ 2.25
HIST2H3A-201ENST00000403683 USP17L10C9JJH3 530 aa29.11■■■□□ 2.25
HIST2H3A-201ENST00000403683 SPP2Q13103 211 aa29.11■■■□□ 2.25
HIST2H3A-201ENST00000403683 HEATR3Q7Z4Q2 680 aa29.11■■■□□ 2.25
HIST2H3A-201ENST00000403683 ADGRF4Q8IZF3 695 aa29.11■■■□□ 2.25
HIST2H3A-201ENST00000403683 PIGSQ96S52 555 aa29.11■■■□□ 2.25
HIST2H3A-201ENST00000403683 RIOX1Q9H6W3 641 aa29.11■■■□□ 2.25
HIST2H3A-201ENST00000403683 ATAD5Q96QE3 1844 aa29.11■■■□□ 2.25
HIST2H3A-201ENST00000403683 NFKBIBQ15653 356 aa29.1■■■□□ 2.25
HIST2H3A-201ENST00000403683 NOL9Q5SY16 702 aaKnown RBP29.1■■■□□ 2.25
HIST2H3A-201ENST00000403683 FAM83BQ5T0W9 1011 aa29.1■■■□□ 2.25
HIST2H3A-201ENST00000403683 ARMC9Q7Z3E5 817 aa29.1■■■□□ 2.25
HIST2H3A-201ENST00000403683 BAZ2BQ9UIF8 2168 aaKnown RBP29.1■■■□□ 2.25
HIST2H3A-201ENST00000403683 MTMR2Q13614 643 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 VGLL4Q14135 290 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 ZNF280CQ8ND82 737 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 RGS22Q8NE09 1264 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 GPKOWQ92917 476 aaPredicted RBP eCLIP29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 KIAA1683Q9H0B3 1180 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 TRIM75PA6NK02 468 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 GOLGA6L22H0YM25 854 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 TRAF5O00463 557 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 NCLP19338 710 aaKnown RBP29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 KIAA1755Q5JYT7 1200 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 WDR18Q9BV38 432 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 JMJD4Q9H9V9 463 aa29.09■■■□□ 2.25
HIST2H3A-201ENST00000403683 USP14P54578 494 aa29.08■■■□□ 2.25
HIST2H3A-201ENST00000403683 NLRP5P59047 1200 aa29.08■■■□□ 2.25
HIST2H3A-201ENST00000403683 RESTQ13127 1097 aa29.08■■■□□ 2.25
HIST2H3A-201ENST00000403683 CHAMP1Q96JM3 812 aa29.08■■■□□ 2.25
HIST2H3A-201ENST00000403683 MMP1P03956 469 aa29.07■■■□□ 2.24
HIST2H3A-201ENST00000403683 SAMD1Q6SPF0 538 aaPredicted RBP29.07■■■□□ 2.24
HIST2H3A-201ENST00000403683 MOB2Q70IA6 237 aa29.07■■■□□ 2.24
HIST2H3A-201ENST00000403683 ANKRD13AQ8IZ07 590 aa29.07■■■□□ 2.24
HIST2H3A-201ENST00000403683 BRMS1Q9HCU9 246 aa29.07■■■□□ 2.24
HIST2H3A-201ENST00000403683 MYH6P13533 1939 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms