RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PRKCZQ05513 592 aa22.66■■□□□ 1.22
RTN4-207ENST00000402434 RCSD1Q6JBY9 416 aa22.66■■□□□ 1.22
RTN4-207ENST00000402434 GMCL1Q96IK5 515 aa22.66■■□□□ 1.22
RTN4-207ENST00000402434 LSG1Q9H089 658 aaKnown RBP22.66■■□□□ 1.22
RTN4-207ENST00000402434 PORCNQ9H237 461 aa22.66■■□□□ 1.22
RTN4-207ENST00000402434 CNNM2Q9H8M5 875 aa22.66■■□□□ 1.22
RTN4-207ENST00000402434 PPP1R9AQ9ULJ8 1098 aa22.66■■□□□ 1.22
RTN4-207ENST00000402434 PARP14Q460N5 1801 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 KDM4AO75164 1064 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 MAPK4P31152 587 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 SLFN13Q68D06 897 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 ATG4CQ96DT6 458 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 KRT23Q9C075 422 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 ZSWIM5Q9P217 1185 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 GJD2Q9UKL4 321 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 GABRQQ9UN88 632 aa22.65■■□□□ 1.22
RTN4-207ENST00000402434 B4E1Z4 1266 aa22.64■■□□□ 1.21
RTN4-207ENST00000402434 TOP1P11387 765 aaKnown RBP22.64■■□□□ 1.21
RTN4-207ENST00000402434 FLT3LGP49771 235 aa22.64■■□□□ 1.21
RTN4-207ENST00000402434 CCNA1P78396 465 aa22.64■■□□□ 1.21
RTN4-207ENST00000402434 CASC1Q6TDU7 716 aa22.64■■□□□ 1.21
RTN4-207ENST00000402434 ARMC5Q96C12 935 aa22.64■■□□□ 1.21
RTN4-207ENST00000402434 TMEM47Q9BQJ4 181 aa22.64■■□□□ 1.21
RTN4-207ENST00000402434 RBM8AQ9Y5S9 174 aaKnown RBP22.64■■□□□ 1.21
RTN4-207ENST00000402434 A0A0G2JMZ2 1700 aa22.63■■□□□ 1.21
RTN4-207ENST00000402434 IRF5Q13568 498 aa22.63■■□□□ 1.21
RTN4-207ENST00000402434 DGKHQ86XP1 1220 aa22.63■■□□□ 1.21
RTN4-207ENST00000402434 CCDC85CA6NKD9 419 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 VWA5AO00534 786 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 BMP3P12645 472 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 CCDC178Q5BJE1 867 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 IQCA1Q86XH1 822 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 PRPF38AQ8NAV1 312 aaKnown RBP22.62■■□□□ 1.21
RTN4-207ENST00000402434 RAET1EQ8TD07 263 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 ANKS1AQ92625 1134 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 SLF1Q9BQI6 1058 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 FEM1BQ9UK73 627 aa22.62■■□□□ 1.21
RTN4-207ENST00000402434 MCCP23508 829 aa22.61■■□□□ 1.21
RTN4-207ENST00000402434 SLC1A4P43007 532 aa22.61■■□□□ 1.21
RTN4-207ENST00000402434 SLC9C1Q4G0N8 1177 aa22.61■■□□□ 1.21
RTN4-207ENST00000402434 GPR142Q7Z601 462 aa22.61■■□□□ 1.21
RTN4-207ENST00000402434 CCAR1Q8IX12 1150 aaKnown RBP22.61■■□□□ 1.21
RTN4-207ENST00000402434 MOV10L1Q9BXT6 1211 aaKnown RBP22.61■■□□□ 1.21
RTN4-207ENST00000402434 SPATC1LQ9H0A9 340 aa22.61■■□□□ 1.21
RTN4-207ENST00000402434 ANO2Q9NQ90 1003 aa22.61■■□□□ 1.21
RTN4-207ENST00000402434 TAF6LQ9Y6J9 622 aa22.61■■□□□ 1.21
RTN4-207ENST00000402434 TMEM132BQ14DG7 1078 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 NBPF11Q86T75 865 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 REPS2Q8NFH8 660 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 ZSCAN10Q96SZ4 725 aaPredicted RBP22.6■■□□□ 1.21
RTN4-207ENST00000402434 ZKSCAN3Q9BRR0 538 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 CENPFP49454 3210 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 E7EWF7 191 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 PLA2G6O60733 806 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 GRK4P32298 578 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 TRDNQ13061 729 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 NECTIN1Q15223 517 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 SAMD1Q6SPF0 538 aaPredicted RBP22.6■■□□□ 1.21
RTN4-207ENST00000402434 PLEKHH3Q7Z736 793 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 SHCBP1Q8NEM2 672 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 PXYLP1Q8TE99 480 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 ZNF333Q96JL9 665 aa22.6■■□□□ 1.21
RTN4-207ENST00000402434 TMEM232C9JQI7 657 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 CAPN15O75808 1086 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 STAT2P52630 851 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 MORN1Q5T089 497 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 CHURC1Q8WUH1 139 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 DCAF4Q8WV16 495 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 SOCS4Q8WXH5 440 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 USP6NLQ92738 828 aa22.59■■□□□ 1.21
RTN4-207ENST00000402434 ZNF214Q9UL59 606 aaPredicted RBP22.59■■□□□ 1.21
RTN4-207ENST00000402434 ADCY3O60266 1144 aa22.58■■□□□ 1.2
RTN4-207ENST00000402434 STOX1Q6ZVD7 989 aa22.58■■□□□ 1.2
RTN4-207ENST00000402434 FAM160B2Q86V87 743 aa22.58■■□□□ 1.2
RTN4-207ENST00000402434 ENAHQ8N8S7 591 aaPredicted RBP22.58■■□□□ 1.2
RTN4-207ENST00000402434 SLAIN1Q8ND83 568 aa22.58■■□□□ 1.2
RTN4-207ENST00000402434 SH3TC2Q8TF17 1288 aa22.58■■□□□ 1.2
RTN4-207ENST00000402434 NUDT12Q9BQG2 462 aa22.58■■□□□ 1.2
RTN4-207ENST00000402434 ATP2A1O14983 1001 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 SNHG28P0DPA3 235 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 ERCC3P19447 782 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 PLS1Q14651 629 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 CYB5R4Q7L1T6 521 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 RASGRP2Q7LDG7 609 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 NCOA7Q8NI08 942 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 KIFC2Q96AC6 838 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 MROH8Q9H579 483 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 SLC38A10Q9HBR0 1119 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 PLXNB2O15031 1838 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 COL11A1P12107 1806 aaPredicted RBP22.57■■□□□ 1.2
RTN4-207ENST00000402434 TNKSO95271 1327 aa22.57■■□□□ 1.2
RTN4-207ENST00000402434 SLC27A2O14975 620 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 STRNO43815 780 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 SLC25A27O95847 323 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 FDX1P10109 184 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 XRCC5P13010 732 aaKnown RBP22.56■■□□□ 1.2
RTN4-207ENST00000402434 PTPREP23469 700 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 STAT3P40763 770 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 KCTD1Q719H9 257 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 RIOX2Q8IUF8 465 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms