RNA–Protein interactions for RNA: ENST00000401979.6

FAM49B-201, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-201ENST00000401979 ZNF543Q08ER8 600 aa18.1■□□□□ 0.49
FAM49B-201ENST00000401979 ACER1Q8TDN7 264 aa18.1■□□□□ 0.49
FAM49B-201ENST00000401979 ZNF526Q8TF50 670 aaPredicted RBP18.1■□□□□ 0.49
FAM49B-201ENST00000401979 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
FAM49B-201ENST00000401979 ZKSCAN4Q969J2 545 aaPredicted RBP18.1■□□□□ 0.49
FAM49B-201ENST00000401979 SYNPO2Q9UMS6 1093 aa18.1■□□□□ 0.49
FAM49B-201ENST00000401979 SSC5DA1L4H1 1573 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 ZYXQ15942 572 aaKnown RBP18.09■□□□□ 0.49
FAM49B-201ENST00000401979 FOXD4L6Q3SYB3 417 aaPredicted RBP18.09■□□□□ 0.49
FAM49B-201ENST00000401979 OTUD7BQ6GQQ9 843 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 FOXD4L3Q6VB84 417 aaPredicted RBP18.09■□□□□ 0.49
FAM49B-201ENST00000401979 KCTD1Q719H9 257 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 CCDC84Q86UT8 332 aaPredicted RBP18.09■□□□□ 0.49
FAM49B-201ENST00000401979 SCYL3Q8IZE3 742 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 FBXO18Q8NFZ0 1043 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 KLRG1Q96E93 195 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 CDCA5Q96FF9 252 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 GLIS2Q9BZE0 524 aaPredicted RBP18.09■□□□□ 0.49
FAM49B-201ENST00000401979 ZNF112Q9UJU3 913 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 TMX2Q9Y320 296 aa18.09■□□□□ 0.49
FAM49B-201ENST00000401979 NDUFB10O96000 172 aa18.08■□□□□ 0.49
FAM49B-201ENST00000401979 SPICE1Q8N0Z3 855 aa18.08■□□□□ 0.49
FAM49B-201ENST00000401979 SPZ1Q9BXG8 430 aa18.08■□□□□ 0.49
FAM49B-201ENST00000401979 UBA5Q9GZZ9 404 aa18.08■□□□□ 0.49
FAM49B-201ENST00000401979 CPVLQ9H3G5 476 aa18.08■□□□□ 0.49
FAM49B-201ENST00000401979 VAT1LQ9HCJ6 419 aa18.08■□□□□ 0.49
FAM49B-201ENST00000401979 IKQ13123 557 aaPredicted RBP18.08■□□□□ 0.48
FAM49B-201ENST00000401979 GNL2Q13823 731 aaKnown RBP18.08■□□□□ 0.48
FAM49B-201ENST00000401979 TTLL12Q14166 644 aaPredicted RBP18.08■□□□□ 0.48
FAM49B-201ENST00000401979 RRP36Q96EU6 259 aaKnown RBP18.08■□□□□ 0.48
FAM49B-201ENST00000401979 GJB4Q9NTQ9 266 aa18.08■□□□□ 0.48
FAM49B-201ENST00000401979 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
FAM49B-201ENST00000401979 SEC63Q9UGP8 760 aaKnown RBP18.08■□□□□ 0.48
FAM49B-201ENST00000401979 DOCK1Q14185 1865 aa18.08■□□□□ 0.48
FAM49B-201ENST00000401979 POTEIP0CG38 1075 aa18.07■□□□□ 0.48
FAM49B-201ENST00000401979 POTEJP0CG39 1038 aa18.07■□□□□ 0.48
FAM49B-201ENST00000401979 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
FAM49B-201ENST00000401979 USP2O75604 605 aaPredicted RBP18.06■□□□□ 0.48
FAM49B-201ENST00000401979 SCG2P13521 617 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 SMARCA1P28370 1054 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 IREB2P48200 963 aaKnown RBP18.06■□□□□ 0.48
FAM49B-201ENST00000401979 MAP1SQ66K74 1059 aaPredicted RBP18.06■□□□□ 0.48
FAM49B-201ENST00000401979 KRT40Q6A162 431 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 GMCL1Q96IK5 515 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 AS3MTQ9HBK9 375 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 CYTH3O43739 400 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 BMP3P12645 472 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 SAFBQ15424 915 aaKnown RBP eCLIP18.06■□□□□ 0.48
FAM49B-201ENST00000401979 PKN1Q16512 942 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
FAM49B-201ENST00000401979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.06■□□□□ 0.482e-6■■■□□ 15.6
FAM49B-201ENST00000401979 NUP88Q99567 741 aaPredicted RBP18.06■□□□□ 0.48
FAM49B-201ENST00000401979 ZSCAN16Q9H4T2 348 aaPredicted RBP18.06■□□□□ 0.48
FAM49B-201ENST00000401979 VCPKMTQ9H867 229 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 CSADQ9Y600 493 aa18.06■□□□□ 0.48
FAM49B-201ENST00000401979 SLC16A2P36021 539 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 TTBK2Q6IQ55 1244 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 VPS54Q9P1Q0 977 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 GOLGA6L22H0YM25 854 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 BAG4O95429 457 aaKnown RBP18.05■□□□□ 0.48
FAM49B-201ENST00000401979 PTPRAP18433 802 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 MAP3K9P80192 1104 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 HEATR3Q7Z4Q2 680 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 RGS22Q8NE09 1264 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 NMRK2Q9NPI5 230 aa18.05■□□□□ 0.48
FAM49B-201ENST00000401979 TMEM232C9JQI7 657 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 NCLP19338 710 aaKnown RBP18.04■□□□□ 0.48
FAM49B-201ENST00000401979 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 SLC35G1Q2M3R5 365 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 PIGSQ96S52 555 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 ZNF408Q9H9D4 720 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 KCNJ14Q9UNX9 436 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 ZHX2Q9Y6X8 837 aa18.04■□□□□ 0.48
FAM49B-201ENST00000401979 USP17L10C9JJH3 530 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 SPP2Q13103 211 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 VGLL4Q14135 290 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 NOL9Q5SY16 702 aaKnown RBP18.03■□□□□ 0.48
FAM49B-201ENST00000401979 LDHDQ86WU2 507 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 GPKOWQ92917 476 aaPredicted RBP eCLIP18.03■□□□□ 0.484e-6■■□□□ 12
FAM49B-201ENST00000401979 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 MMP1P03956 469 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 STAT2P52630 851 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 MTMR2Q13614 643 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 FAM83BQ5T0W9 1011 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 ARMC9Q7Z3E5 817 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 ZNF280CQ8ND82 737 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 KIAA1683Q9H0B3 1180 aa18.03■□□□□ 0.48
FAM49B-201ENST00000401979 USP14P54578 494 aa18.02■□□□□ 0.48
FAM49B-201ENST00000401979 RESTQ13127 1097 aa18.02■□□□□ 0.48
FAM49B-201ENST00000401979 CLEC17AQ6ZS10 378 aa18.02■□□□□ 0.48
FAM49B-201ENST00000401979 CHAMP1Q96JM3 812 aa18.02■□□□□ 0.48
FAM49B-201ENST00000401979 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
FAM49B-201ENST00000401979 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
FAM49B-201ENST00000401979 MCM4P33991 863 aa18.01■□□□□ 0.47
FAM49B-201ENST00000401979 NLRP5P59047 1200 aa18.01■□□□□ 0.47
FAM49B-201ENST00000401979 KIF23Q02241 960 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-201ENST00000401979 KIAA1755Q5JYT7 1200 aa18.01■□□□□ 0.47
FAM49B-201ENST00000401979 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms