RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
CACNA1C-208ENST00000399601 EXOC7Q9UPT5 735 aa12.25□□□□□ -0.45
CACNA1C-208ENST00000399601 SATB2Q9UPW6 733 aa12.25□□□□□ -0.45
CACNA1C-208ENST00000399601 ORC6Q9Y5N6 252 aa12.25□□□□□ -0.45
CACNA1C-208ENST00000399601 RARSP54136 660 aaKnown RBP12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 TRAIPQ9BWF2 469 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 CCDC68Q9H2F9 335 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 OCRLQ01968 901 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 RCN2Q14257 317 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 TTC19Q6DKK2 380 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 PLCB1Q9NQ66 1216 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 INTUQ9ULD6 942 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 PAXBP1Q9Y5B6 917 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 ARHGEF35A5YM69 484 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 TNFAIP3P21580 790 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 NOX5Q96PH1 765 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 POLR3CQ9BUI4 534 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 DPYSL4O14531 572 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 ALAS1P13196 640 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 ARHGDIAP52565 204 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 NECAB1Q8N987 351 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 COA7Q96BR5 231 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 G3BP2Q9UN86 482 aaKnown RBP12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 NDUFAB1O14561 156 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 RASIP1Q5U651 963 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 PGBD1Q96JS3 809 aa12.24□□□□□ -0.45
CACNA1C-208ENST00000399601 hCG_2014768A0A024R1R8 64 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 M0R2C6 588 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 RAET1EQ8TD07 263 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 APOL6Q9BWW8 343 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 TBC1D7Q9P0N9 293 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 GRM8O00222 908 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 TMOD1P28289 359 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ECE1P42892 770 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 CARSP49589 748 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 TNNC1P63316 161 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 CFAP61Q8NHU2 1237 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 TBC1D22AQ8WUA7 517 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 RAPGEF5Q92565 580 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 PPP2R3CQ969Q6 453 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 FAM83GA6ND36 823 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 GRIN3BO60391 1043 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 GFAPP14136 432 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 LRMPQ12912 555 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ANGPT1Q15389 498 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 TRIM60Q495X7 471 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 GDAP1L1Q96MZ0 367 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ADPGKQ9BRR6 497 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ABCC5O15440 1437 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 PPWD1Q96BP3 646 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ORAI2Q96SN7 254 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 SCNN1DP51172 638 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 VAV2P52735 878 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 ELMOD1Q8N336 334 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 GABPB2Q8TAK5 448 aaPredicted RBP12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 UHMK1Q8TAS1 419 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-208ENST00000399601 PDE8AO60658 829 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 ITGA6P23229 1130 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 ZNF165P49910 485 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 CCDC92Q53HC0 331 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 RPAINQ86UA6 219 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 CCDC26Q8TAB7 109 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 EIF2AQ9BY44 585 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 AATFQ9NY61 560 aaKnown RBP eCLIP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 SCOCQ9UIL1 159 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 DNAJC8O75937 253 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 TTC4O95801 387 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 BEND3Q5T5X7 828 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 CCDC13Q8IYE1 715 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 B4GALNT2Q8NHY0 566 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 KRT2P35908 639 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 KRT81Q14533 505 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 SPATS2Q86XZ4 545 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 ARHGAP24Q8N264 748 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 PIM2Q9P1W9 311 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 KCNH4Q9UQ05 1017 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 BNIP3LO60238 219 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 ANKRD20A3Q5VUR7 823 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 RAPH1Q70E73 1250 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 SCAND2PQ9GZW5 306 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 SH2B1Q9NRF2 756 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-208ENST00000399601 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms