RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 TNFAIP3P21580 790 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 ANXA13P27216 316 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 PTPN14Q15678 1187 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 SYDE2Q5VT97 1194 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 IFNL3Q8IZI9 196 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
USP47-203ENST00000399455 MTUS1Q9ULD2 1270 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 A0A1W2PRG0 241 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 SORBS3O60504 671 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 CRCPO75575 148 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 TNNI1P19237 187 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 CHMLP26374 656 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 C1orf228Q6PIY5 440 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 SESTD1Q86VW0 696 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 KLHDC4Q8TBB5 520 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 NACC1Q96RE7 527 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 N4BP1O75113 896 aaKnown RBP8.84□□□□□ -0.99
USP47-203ENST00000399455 TACC1O75410 805 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 CCDC175P0C221 793 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 BMP3P12645 472 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 DAAM2Q86T65 1068 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 NLRP10Q86W26 655 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 SUGCTQ9HAC7 445 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 GPR108Q9NPR9 543 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 CUL4BQ13620 913 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 PRR16Q569H4 304 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 PODNQ7Z5L7 613 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 CCDC102AQ96A19 550 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 TSPYL2Q9H2G4 693 aaPredicted RBP8.84□□□□□ -0.99
USP47-203ENST00000399455 CGNQ9P2M7 1197 aaKnown RBP8.84□□□□□ -0.99
USP47-203ENST00000399455 PARP2Q9UGN5 583 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 POLR2BP30876 1174 aaKnown RBP8.84□□□□□ -0.99
USP47-203ENST00000399455 IL17REQ8NFR9 667 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 MMP19Q99542 508 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 NUB1Q9Y5A7 615 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 EXOC3O60645 756 aa8.83□□□□□ -1
USP47-203ENST00000399455 PARK7Q99497 189 aaKnown RBP8.83□□□□□ -1
USP47-203ENST00000399455 GLI2P10070 1586 aa8.83□□□□□ -1
USP47-203ENST00000399455 PRDM15P57071 1507 aaPredicted RBP8.83□□□□□ -1
USP47-203ENST00000399455 ZBBXA8MT70 800 aa8.83□□□□□ -1
USP47-203ENST00000399455 CAPN9O14815 690 aa8.83□□□□□ -1
USP47-203ENST00000399455 CRKP46108 304 aa8.83□□□□□ -1
USP47-203ENST00000399455 HS1BP3Q53T59 392 aa8.83□□□□□ -1
USP47-203ENST00000399455 CACTINQ8WUQ7 758 aaKnown RBP8.83□□□□□ -1
USP47-203ENST00000399455 CPSF1Q10570 1443 aaKnown RBP8.83□□□□□ -1
USP47-203ENST00000399455 CEP170BQ9Y4F5 1589 aaPredicted RBP8.83□□□□□ -1
USP47-203ENST00000399455 SRGAP2BP0DMP2 458 aa8.83□□□□□ -1
USP47-203ENST00000399455 CABP7Q86V35 215 aa8.83□□□□□ -1
USP47-203ENST00000399455 ANKRD36BP1Q96IX9 119 aa8.83□□□□□ -1
USP47-203ENST00000399455 BCCIPQ9P287 314 aaKnown RBP eCLIP8.83□□□□□ -1
USP47-203ENST00000399455 TRPM1Q7Z4N2 1603 aa8.83□□□□□ -1
USP47-203ENST00000399455 MMS19Q96T76 1030 aa8.83□□□□□ -1
USP47-203ENST00000399455 FEM1BQ9UK73 627 aa8.83□□□□□ -1
USP47-203ENST00000399455 KIF28PB7ZC32 967 aa8.83□□□□□ -1
USP47-203ENST00000399455 PSAPP07602 524 aa8.83□□□□□ -1
USP47-203ENST00000399455 RASA3Q14644 834 aa8.83□□□□□ -1
USP47-203ENST00000399455 PDZD4Q76G19 769 aaPredicted RBP8.83□□□□□ -1
USP47-203ENST00000399455 WRNIP1Q96S55 665 aa8.83□□□□□ -1
USP47-203ENST00000399455 DIP2AQ14689 1571 aa8.83□□□□□ -1
USP47-203ENST00000399455 PFDN6O15212 129 aa8.83□□□□□ -1
USP47-203ENST00000399455 PDE6AP16499 860 aa8.83□□□□□ -1
USP47-203ENST00000399455 KCNJ6P48051 423 aa8.83□□□□□ -1
USP47-203ENST00000399455 SRGAP1Q7Z6B7 1085 aa8.83□□□□□ -1
USP47-203ENST00000399455 SP8Q8IXZ3 490 aa8.83□□□□□ -1
USP47-203ENST00000399455 UBXN4Q92575 508 aa8.83□□□□□ -1
USP47-203ENST00000399455 BRIP1Q9BX63 1249 aa8.83□□□□□ -1
USP47-203ENST00000399455 PLA2R1Q13018 1463 aa8.82□□□□□ -1
USP47-203ENST00000399455 CPS1P31327 1500 aa8.82□□□□□ -1
USP47-203ENST00000399455 SHTN1A0MZ66 631 aa8.82□□□□□ -1
USP47-203ENST00000399455 ZNF233A6NK53 670 aa8.82□□□□□ -1
USP47-203ENST00000399455 F13A1P00488 732 aa8.82□□□□□ -1
USP47-203ENST00000399455 XPAP23025 273 aaPredicted RBP8.82□□□□□ -1
USP47-203ENST00000399455 ASIC2Q16515 512 aa8.82□□□□□ -1
USP47-203ENST00000399455 ZNF449Q6P9G9 518 aa8.82□□□□□ -1
USP47-203ENST00000399455 PNMA1Q8ND90 353 aa8.82□□□□□ -1
USP47-203ENST00000399455 TCEANC2Q96MN5 208 aa8.82□□□□□ -1
USP47-203ENST00000399455 PRDM5Q9NQX1 630 aaPredicted RBP8.82□□□□□ -1
USP47-203ENST00000399455 SLC12A6Q9UHW9 1150 aa8.82□□□□□ -1
USP47-203ENST00000399455 GOLGA8CPA6NN73 597 aa8.82□□□□□ -1
USP47-203ENST00000399455 GDF11O95390 407 aa8.82□□□□□ -1
USP47-203ENST00000399455 AK2P54819 239 aa8.82□□□□□ -1
USP47-203ENST00000399455 KCNQ4P56696 695 aa8.82□□□□□ -1
USP47-203ENST00000399455 UBE3CQ15386 1083 aa8.82□□□□□ -1
USP47-203ENST00000399455 CCDC63Q8NA47 563 aa8.82□□□□□ -1
USP47-203ENST00000399455 KIF18AQ8NI77 898 aa8.82□□□□□ -1
USP47-203ENST00000399455 GRPEL1Q9HAV7 217 aa8.82□□□□□ -1
USP47-203ENST00000399455 SERPINB13Q9UIV8 391 aa8.82□□□□□ -1
USP47-203ENST00000399455 CTNND2Q9UQB3 1225 aa8.82□□□□□ -1
USP47-203ENST00000399455 XRCC6P12956 609 aaKnown RBP eCLIP8.82□□□□□ -1
USP47-203ENST00000399455 SPECC1Q5M775 1068 aa8.82□□□□□ -1
USP47-203ENST00000399455 C7orf31Q8N865 590 aa8.82□□□□□ -1
USP47-203ENST00000399455 NAP1L3Q99457 506 aaPredicted RBP8.82□□□□□ -1
USP47-203ENST00000399455 KIF9Q9HAQ2 790 aa8.82□□□□□ -1
USP47-203ENST00000399455 K7ENM7 598 aa8.82□□□□□ -1
USP47-203ENST00000399455 MCM4P33991 863 aa8.82□□□□□ -1
USP47-203ENST00000399455 MIGA2Q7L4E1 593 aa8.82□□□□□ -1
USP47-203ENST00000399455 DCAF4Q8WV16 495 aa8.82□□□□□ -1
USP47-203ENST00000399455 ARHGEF1Q92888 912 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms