RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ADD3Q9UEY8 706 aaKnown RBP26.18■■□□□ 1.78
RABGGTA-202ENST00000399409 XDHP47989 1333 aa26.18■■□□□ 1.78
RABGGTA-202ENST00000399409 NPHP1O15259 732 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 TXLNAP40222 546 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 KMT5BQ4FZB7 885 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 PPFIBP1Q86W92 1011 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 CCDC24Q8N4L8 307 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 ANKIB1Q9P2G1 1089 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 NHSQ6T4R5 1651 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 C15orf52Q6ZUT6 534 aaKnown RBP26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 ZNF804AQ7Z570 1209 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 MKNK2Q9HBH9 465 aa26.17■■□□□ 1.78
RABGGTA-202ENST00000399409 CASP1P29466 404 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 PBX1P40424 430 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 DAGLBQ8NCG7 672 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 CCDC148Q8NFR7 591 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 NGLY1Q96IV0 654 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 STX17P56962 302 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 IL17AQ16552 155 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 C4orf32Q8N8J7 132 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 SH3RF3Q8TEJ3 882 aaPredicted RBP26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 JAG2Q9Y219 1238 aa26.16■■□□□ 1.78
RABGGTA-202ENST00000399409 LZTS2Q9BRK4 669 aa26.15■■□□□ 1.78
RABGGTA-202ENST00000399409 RWDD2AQ9UIY3 292 aa26.15■■□□□ 1.78
RABGGTA-202ENST00000399409 TNRC6CQ9HCJ0 1690 aaKnown RBP26.15■■□□□ 1.78
RABGGTA-202ENST00000399409 SPAG1Q07617 926 aa26.14■■□□□ 1.78
RABGGTA-202ENST00000399409 FBXO38Q6PIJ6 1188 aa26.14■■□□□ 1.78
RABGGTA-202ENST00000399409 IGSF22Q8N9C0 903 aa26.14■■□□□ 1.78
RABGGTA-202ENST00000399409 ITIH6Q6UXX5 1313 aa26.14■■□□□ 1.78
RABGGTA-202ENST00000399409 TOM1O60784 492 aa26.14■■□□□ 1.77
RABGGTA-202ENST00000399409 VEGFAP15692 232 aaPredicted RBP26.14■■□□□ 1.77
RABGGTA-202ENST00000399409 ZNF444Q8N0Y2 327 aaPredicted RBP26.14■■□□□ 1.77
RABGGTA-202ENST00000399409 ZNF287Q9HBT7 754 aa26.14■■□□□ 1.77
RABGGTA-202ENST00000399409 MAD2L2Q9UI95 211 aa26.14■■□□□ 1.77
RABGGTA-202ENST00000399409 CTNND2Q9UQB3 1225 aa26.14■■□□□ 1.77
RABGGTA-202ENST00000399409 SBF2Q86WG5 1849 aa26.14■■□□□ 1.77
RABGGTA-202ENST00000399409 TEX33O43247 280 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 TSPY3P0CV98 308 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 TSPY8P0CW00 308 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 RRAGBQ5VZM2 374 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 TOGARAM2Q6ZUX3 1019 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 CCDC51Q96ER9 411 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 LIMA1Q9UHB6 759 aaKnown RBP26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 CCDC194A0A1B0GVG4 234 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 URI1O94763 535 aaPredicted RBP26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 CASQ1P31415 396 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 RFC4P35249 363 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 ERCC6LQ2NKX8 1250 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 ZNF658Q5TYW1 1059 aaPredicted RBP26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 MNS1Q8NEH6 495 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 DYNLL2Q96FJ2 89 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 C8orf37Q96NL8 207 aa26.13■■□□□ 1.77
RABGGTA-202ENST00000399409 M0R2N6 131 aa26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 H2AFXP16104 143 aaPredicted RBP26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 SMYD4Q8IYR2 804 aaPredicted RBP26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 PARP3Q9Y6F1 533 aa26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 TPM1P09493 284 aa26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 SEMA3FQ13275 785 aa26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 UTP14CQ5TAP6 766 aaKnown RBP26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 STAG2Q8N3U4 1231 aa26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 GPKOWQ92917 476 aaPredicted RBP eCLIP26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 GTPBP4Q9BZE4 634 aaKnown RBP26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 BLZF1Q9H2G9 400 aa26.12■■□□□ 1.77
RABGGTA-202ENST00000399409 FAM205AQ6ZU69 1335 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 LRRC10BA6NIK2 292 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 CCDC175P0C221 793 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 ZSCAN20P17040 1043 aaPredicted RBP26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 GNG11P61952 73 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 PIP4K2BP78356 416 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 PAK1Q13153 545 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 TRAPPC3LQ5T215 181 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 ANKRD20A12PQ8NF67 263 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 NAV1Q8NEY1 1877 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 LAD1O00515 517 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 ADAMTS3O15072 1205 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 RBL2Q08999 1139 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 CNGA4Q8IV77 575 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 UBXN4Q92575 508 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 STAMQ92783 540 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 MTRQ99707 1265 aa26.11■■□□□ 1.77
RABGGTA-202ENST00000399409 RPN1P04843 607 aaKnown RBP26.1■■□□□ 1.77
RABGGTA-202ENST00000399409 STAT6P42226 847 aa26.1■■□□□ 1.77
RABGGTA-202ENST00000399409 DTHD1Q6ZMT9 781 aa26.1■■□□□ 1.77
RABGGTA-202ENST00000399409 BARHL2Q9NY43 387 aa26.1■■□□□ 1.77
RABGGTA-202ENST00000399409 EFCAB8A8MWE9 144 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 MYL1P05976 194 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 DMTNQ08495 405 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 SLC4A8Q2Y0W8 1093 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 CNBD1Q8NA66 436 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 TGFBRAP1Q8WUH2 860 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 PCDHA6Q9UN73 950 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 PCDHA8Q9Y5H6 950 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 TAF1LQ8IZX4 1826 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 BAZ2BQ9UIF8 2168 aaKnown RBP26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 USP17L3A6NCW0 530 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 USP17L4A6NCW7 530 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 PALM3A6NDB9 673 aaPredicted RBP26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 FANCGO15287 622 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 MFAP3LO75121 409 aa26.09■■□□□ 1.77
RABGGTA-202ENST00000399409 USP17L1Q7RTZ2 530 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms