RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 PROCA1Q8NCQ7 364 aaPredicted RBP14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 EHD4Q9H223 541 aa14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 MCM9Q9NXL9 1143 aa14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 AGTPBP1Q9UPW5 1226 aa14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 GDF11O95390 407 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 PLCD1P51178 756 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 HMGCS2P54868 508 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 BACE1P56817 501 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 JAG1P78504 1218 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 PABPC4Q13310 644 aaKnown RBP eCLIP14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 AAMPQ13685 434 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 SLFNL1Q499Z3 407 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 TATDN1Q6P1N9 297 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 LCORLQ8N3X6 602 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 ARMT1Q9H993 441 aa14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 DCP1AQ9NPI6 582 aaPredicted RBP14.18□□□□□ -0.14
SMIM11A-201ENST00000399292 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 MBD4O95243 580 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 HOXD10P28358 340 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 PSMC4P43686 418 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 SOX10P56693 466 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 CERKLQ49MI3 558 aaPredicted RBP14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 SH3D19Q5HYK7 790 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 TSHZ3Q63HK5 1081 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 SMCR8Q8TEV9 937 aaPredicted RBP14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 SDR42E1Q8WUS8 393 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 ARHGAP39Q9C0H5 1083 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 ATP8A2Q9NTI2 1148 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 TMOD4Q9NZQ9 345 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 ZBTB21Q9ULJ3 1066 aa14.17□□□□□ -0.14
SMIM11A-201ENST00000399292 TTC41PQ6P2S7 1318 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 ADGRA2Q96PE1 1338 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 C19orf81C9J6K1 198 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 USP17L10C9JJH3 530 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 ERC2O15083 957 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 GH2P01242 217 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 BCRP11274 1271 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 PRMT2P55345 433 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 USP46P62068 366 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 HDAC1Q13547 482 aaPredicted RBP14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 MTMR2Q13614 643 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 SHROOM1Q2M3G4 852 aaPredicted RBP14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 TREML2Q5T2D2 321 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 ANKRD45Q5TZF3 282 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 NBPF11Q86T75 865 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 KBTBD3Q8NAB2 608 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 CABP5Q9NP86 173 aa14.16□□□□□ -0.14
SMIM11A-201ENST00000399292 PRKAB2O43741 272 aa14.15□□□□□ -0.14
SMIM11A-201ENST00000399292 CHGBP05060 677 aa14.15□□□□□ -0.14
SMIM11A-201ENST00000399292 ABCB5Q2M3G0 1257 aa14.15□□□□□ -0.14
SMIM11A-201ENST00000399292 LRRFIP1Q32MZ4 808 aaKnown RBP14.15□□□□□ -0.14
SMIM11A-201ENST00000399292 TRIM47Q96LD4 638 aa14.15□□□□□ -0.14
SMIM11A-201ENST00000399292 PUS7LQ9H0K6 701 aaKnown RBP14.15□□□□□ -0.14
SMIM11A-201ENST00000399292 PDE4DIPQ5VU43 2346 aa14.15□□□□□ -0.14
SMIM11A-201ENST00000399292 GLRX3O76003 335 aaKnown RBP14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 ZFYP08048 801 aaPredicted RBP14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 SHMT1P34896 483 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 MMP16P51512 607 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 FCGRTP55899 365 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 GABPAQ06546 454 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 SLC9C1Q4G0N8 1177 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 AMOTL1Q8IY63 956 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 ARMC5Q96C12 935 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 PTCH2Q9Y6C5 1203 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 SLC4A4Q9Y6R1 1079 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 DOCK1Q14185 1865 aa14.14□□□□□ -0.15
SMIM11A-201ENST00000399292 RNF113AO15541 343 aaKnown RBP14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 ZBTB24O43167 697 aaPredicted RBP14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 MX1P20591 662 aa14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 CTGFP29279 349 aa14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 HOXA7P31268 230 aaPredicted RBP14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 GCLCP48506 637 aaPredicted RBP14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 ANKRD13CQ8N6S4 541 aa14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 OTUD7AQ8TE49 926 aaPredicted RBP14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 ASCC2Q9H1I8 757 aaPredicted RBP14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 GPCPD1Q9NPB8 672 aa14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 SRRDQ9UH36 339 aa14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 SWAP70Q9UH65 585 aa14.13□□□□□ -0.15
SMIM11A-201ENST00000399292 USP17L12C9JPN9 530 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 USP17L21D6R901 530 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 MPHOSPH10O00566 681 aaKnown RBP14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 CYP2D6P10635 497 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 CLCN1P35523 988 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 USP14P54578 494 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 IRX3P78415 501 aaPredicted RBP14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 C12orf60Q5U649 245 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 PI4K2BQ8TCG2 481 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 APPBP2Q92624 585 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 STRBPQ96SI9 672 aaKnown RBP14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 USB1Q9BQ65 265 aaKnown RBP14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 TOR4AQ9NXH8 423 aa14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 SUPT16HQ9Y5B9 1047 aaKnown RBP14.12□□□□□ -0.15
SMIM11A-201ENST00000399292 FOCADQ5VW36 1801 aa14.11□□□□□ -0.15
SMIM11A-201ENST00000399292 EXOC6Q8TAG9 804 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms