RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 FLOT1O75955 427 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 NAA30Q147X3 362 aaPredicted RBP13.82□□□□□ -0.2
SOCS6-201ENST00000397942 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 NCAPH2Q6IBW4 605 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 FMR1NBQ8N0W7 255 aaPredicted RBP13.82□□□□□ -0.2
SOCS6-201ENST00000397942 RASSF4Q9H2L5 321 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 ATP10DQ9P241 1426 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 CFBP00751 764 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 TNFAIP3P21580 790 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 KCNQ4P56696 695 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 KLHL7Q8IXQ5 586 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 TRIM58Q8NG06 486 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 PDE4DIPQ5VU43 2346 aa13.82□□□□□ -0.2
SOCS6-201ENST00000397942 ARAP3Q8WWN8 1544 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 LONP1P36776 959 aaKnown RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 RPS6KA1Q15418 735 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 MYOCDQ8IZQ8 938 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 NT5C3AQ9H0P0 336 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 MTUS1Q9ULD2 1270 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 NBPF26B4DH59 902 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 BACH1O14867 736 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 PPARDQ03181 441 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 ZYXQ15942 572 aaKnown RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 FAM26FQ5R3K3 315 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 IFT20Q8IY31 132 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 SLC35F6Q8N357 371 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 NBPF15Q8N660 670 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 SPOPO43791 374 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 DPP8Q6V1X1 898 aaPredicted RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 RBM17Q96I25 401 aaKnown RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 INCENPQ9NQS7 918 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 ANKARQ7Z5J8 1434 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 ZNF804BA4D1E1 1349 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 DDAH1O94760 285 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 PPFIA1Q13136 1202 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 EXOC3O60645 756 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 CCDC144BQ3MJ40 725 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 STOX1Q6ZVD7 989 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 CPXCR1Q8N123 301 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 PLEKHA4Q9H4M7 779 aa13.81□□□□□ -0.2
SOCS6-201ENST00000397942 SRPRBQ9Y5M8 271 aaKnown RBP13.81□□□□□ -0.2
SOCS6-201ENST00000397942 VSTM4Q8IW00 320 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 UBLCP1Q8WVY7 318 aaPredicted RBP13.8□□□□□ -0.2
SOCS6-201ENST00000397942 IKBKGQ9Y6K9 419 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
SOCS6-201ENST00000397942 ARHGEF35A5YM69 484 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
SOCS6-201ENST00000397942 SCARF1Q14162 830 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 SFMBT2Q5VUG0 894 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 PAIP2Q9BPZ3 127 aaKnown RBP13.8□□□□□ -0.2
SOCS6-201ENST00000397942 NUCKS1Q9H1E3 243 aaKnown RBP13.8□□□□□ -0.2
SOCS6-201ENST00000397942 UNC13BO14795 1591 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 USP31Q70CQ4 1352 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 LRRC45Q96CN5 670 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 MAN1B1Q9UKM7 699 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 MADDQ8WXG6 1647 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 TCP1P17987 556 aaKnown RBP13.8□□□□□ -0.2
SOCS6-201ENST00000397942 SRGAP1Q7Z6B7 1085 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 TAF6LQ9Y6J9 622 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 CRB1P82279 1406 aa13.8□□□□□ -0.2
SOCS6-201ENST00000397942 ASIC2Q16515 512 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 USH1GQ495M9 461 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 CCDC121Q6ZUS5 278 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 MAEAQ7L5Y9 396 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 RDH13Q8NBN7 331 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.79□□□□□ -0.2
SOCS6-201ENST00000397942 CCDC114Q96M63 670 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 SYNCQ9H7C4 482 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 CCDC151A5D8V7 595 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 ENC1O14682 589 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 PEX26Q7Z412 305 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 LRRC47Q8N1G4 583 aaKnown RBP13.79□□□□□ -0.2
SOCS6-201ENST00000397942 PAK2Q13177 524 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 SELENOSQ9BQE4 189 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 PSTPIP2Q9H939 334 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 USP40Q9NVE5 1235 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 ATP2A1O14983 1001 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
SOCS6-201ENST00000397942 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
SOCS6-201ENST00000397942 LMTK3Q96Q04 1460 aa13.79□□□□□ -0.2
SOCS6-201ENST00000397942 ZCCHC11Q5TAX3 1644 aaKnown RBP13.79□□□□□ -0.2
SOCS6-201ENST00000397942 ACTN4O43707 911 aaKnown RBP13.78□□□□□ -0.2
SOCS6-201ENST00000397942 LONRF2Q1L5Z9 754 aa13.78□□□□□ -0.2
SOCS6-201ENST00000397942 NAP1L3Q99457 506 aaPredicted RBP13.78□□□□□ -0.2
SOCS6-201ENST00000397942 ARHGEF40Q8TER5 1519 aa13.78□□□□□ -0.2
SOCS6-201ENST00000397942 BIRC3Q13489 604 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms