RNA–Protein interactions for RNA: ENST00000397843.6

ARHGEF12-202, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF12, Length 9,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-202ENST00000397843 ATP8A2Q9NTI2 1148 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 ERCC3P19447 782 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 CUL4BQ13620 913 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 MTHFSDQ2M296 383 aaKnown RBP5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 TTC39CQ8N584 583 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 FLAD1Q8NFF5 587 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 MYCBPQ99417 103 aaPredicted RBP5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 SNX14Q9Y5W7 946 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 TARSL2A2RTX5 802 aaKnown RBP5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 RFC4P35249 363 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 BIRC3Q13489 604 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 PROM2Q8N271 834 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 FER1L4A9Z1Z3 1794 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 DNAJC8O75937 253 aaPredicted RBP5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 ATF7P17544 494 aaPredicted RBP5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 ETF1P62495 437 aaKnown RBP5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 HVCN1Q96D96 273 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 OVOS2A0A0J9YW53 1432 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 OVOS2Q6IE36 1432 aa5.37□□□□□ -1.55
ARHGEF12-202ENST00000397843 KCNJ18B7U540 433 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 TTI1O43156 1089 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 TFCP2Q12800 502 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 KCNJ12Q14500 433 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 CALCRLQ16602 461 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 TTLL7Q6ZT98 887 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RAB11FIP4Q86YS3 637 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 PPP4R1Q8TF05 950 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 GFM2Q969S9 779 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 ZNF277Q9NRM2 450 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RWDD2AQ9UIY3 292 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 ANO9A1A5B4 782 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 LMNAP02545 664 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 TROVE2P10155 538 aaKnown RBP eCLIP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RAPGEF1Q13905 1077 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 LMBR1LQ6UX01 489 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 COPS6Q7L5N1 327 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MORC4Q8TE76 937 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 NFE2L3Q9Y4A8 694 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MYH6P13533 1939 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 FAM208AQ9UK61 1670 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 IPO5O00410 1097 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 CCDC125Q86Z20 511 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RNF168Q8IYW5 571 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RNF10Q8N5U6 811 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MAGEB6Q8N7X4 407 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 LRRC59Q96AG4 307 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 DHX58Q96C10 678 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 FGFR1OP2Q9NVK5 253 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 BCCIPQ9P287 314 aaKnown RBP eCLIP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 SPATA31D1Q6ZQQ2 1576 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MAP3K19Q56UN5 1328 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 GRID2IPA4D2P6 1211 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 LRRC63Q05C16 580 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MKRN3Q13064 507 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 PPP2R5AQ15172 486 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 PEX26Q7Z412 305 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RPAINQ86UA6 219 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 CCDC117Q8IWD4 279 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 SPATA5Q8NB90 893 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 JPH2Q9BR39 696 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RIC8AQ9NPQ8 531 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MIS18AQ9NYP9 233 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 IQSEC2Q5JU85 1478 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 IGSF1Q8N6C5 1336 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 ADGRB2O60241 1585 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 ARHGEF37A1IGU5 675 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 AFMP43652 599 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 ZSCAN10Q96SZ4 725 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 TCHPQ9BT92 498 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 CBX8Q9HC52 389 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 NDE1Q9NXR1 346 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 AMFRQ9UKV5 643 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MRVI1Q9Y6F6 885 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MYO5BQ9ULV0 1848 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 IRS4O14654 1257 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 LIFRP42702 1097 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 STRN3Q13033 797 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 CUL4AQ13619 759 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 SPATA1Q5VX52 437 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 HACE1Q8IYU2 909 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 CCDC89Q8N998 374 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 C3orf20Q8ND61 904 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 THAP9Q9H5L6 903 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MCM9Q9NXL9 1143 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 KNDC1Q76NI1 1749 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 SPOPO43791 374 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 RLBP1P12271 317 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 BRD2P25440 801 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 CCT6AP40227 531 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 ILF2Q12905 390 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 MTX1Q13505 466 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 GPATCH4Q5T3I0 446 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 UBLCP1Q8WVY7 318 aaPredicted RBP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 NELFBQ8WX92 580 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 PBKQ96KB5 322 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 DNM3Q9UQ16 869 aa5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.36□□□□□ -1.55
ARHGEF12-202ENST00000397843 PTPRUQ92729 1446 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms