RNA–Protein interactions for RNA: ENST00000397642.3

AL390728.1-201, humanhuman

BASIC

Gene AL390728.1, Length 1,941 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.1-201ENST00000397642 CCNA1P78396 465 aa12.6□□□□□ -0.39
AL390728.1-201ENST00000397642 NKX2-3Q8TAU0 364 aa12.6□□□□□ -0.39
AL390728.1-201ENST00000397642 ESR2Q92731 530 aa12.6□□□□□ -0.39
AL390728.1-201ENST00000397642 ATG4CQ96DT6 458 aa12.6□□□□□ -0.39
AL390728.1-201ENST00000397642 NEDD4P46934 1319 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 MGAMO43451 1857 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 MAPK4P31152 587 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 KIAA1211Q6ZU35 1233 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 MB21D1Q8N884 522 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 GMCL1P1Q8NEA9 526 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 SH3TC2Q8TF17 1288 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
AL390728.1-201ENST00000397642 SLFN13Q68D06 897 aa12.58□□□□□ -0.39
AL390728.1-201ENST00000397642 ARMC5Q96C12 935 aa12.58□□□□□ -0.39
AL390728.1-201ENST00000397642 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.39
AL390728.1-201ENST00000397642 GJD2Q9UKL4 321 aa12.58□□□□□ -0.39
AL390728.1-201ENST00000397642 MKI67P46013 3256 aaKnown RBP12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 B4E1Z4 1266 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 KDM4AO75164 1064 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 MCCP23508 829 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 GRK4P32298 578 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 NOVP48745 357 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 PLS1Q14651 629 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 WDR78Q5VTH9 848 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 GPR142Q7Z601 462 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 MAP4K1Q92918 833 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 PPP1R9AQ9ULJ8 1098 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 ISY1Q9ULR0 285 aaKnown RBP12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 ADAMTS5Q9UNA0 930 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 RLFQ13129 1914 aa12.58□□□□□ -0.4
AL390728.1-201ENST00000397642 VWA5AO00534 786 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 ADCY3O60266 1144 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 MYCP01106 439 aaPredicted RBP12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 BMP3P12645 472 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 SLC1A4P43007 532 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 SOX10P56693 466 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 IRF5Q13568 498 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 PLEKHH3Q7Z736 793 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 PRPF38AQ8NAV1 312 aaKnown RBP12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 ZNF333Q96JL9 665 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 ZKSCAN3Q9BRR0 538 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 MOV10L1Q9BXT6 1211 aaKnown RBP12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 KRT23Q9C075 422 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
AL390728.1-201ENST00000397642 CYP21A2P08686 494 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 ELNP15502 786 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 NT5C2P49902 561 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 TMEM132BQ14DG7 1078 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 RCSD1Q6JBY9 416 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 TTC14Q96N46 770 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 NUDT12Q9BQG2 462 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 TMEM47Q9BQJ4 181 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 CNNM2Q9H8M5 875 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 FEM1BQ9UK73 627 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 TMEM232C9JQI7 657 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 TRDNQ13061 729 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 PXYLP1Q8TE99 480 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 KIFC2Q96AC6 838 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 GMCL1Q96IK5 515 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 IVNS1ABPQ9Y6Y0 642 aa12.56□□□□□ -0.4
AL390728.1-201ENST00000397642 CDC45O75419 566 aa12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 ERCC3P19447 782 aa12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 CYP2B6P20813 491 aa12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 KCTD1Q719H9 257 aa12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 CHURC1Q8WUH1 139 aa12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 SOCS4Q8WXH5 440 aa12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
AL390728.1-201ENST00000397642 STAT3P40763 770 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 STAT2P52630 851 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 MORN1Q5T089 497 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 RASGRP2Q7LDG7 609 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 NCAPG2Q86XI2 1143 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 DGKHQ86XP1 1220 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 SHCBP1Q8NEM2 672 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 IPO9Q96P70 1041 aaKnown RBP12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 ZSCAN10Q96SZ4 725 aaPredicted RBP12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 ZNF214Q9UL59 606 aaPredicted RBP12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 STRNO43815 780 aa12.54□□□□□ -0.4
AL390728.1-201ENST00000397642 ZBED4O75132 1171 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms