RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ALS2Q96Q42 1657 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 TCRBV5S4A2TA0A5A2 114 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 TARSL2A2RTX5 802 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 MFAP3LO75121 409 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 SSR1P43307 286 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ATP2C1P98194 919 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 DNAJC10Q8IXB1 793 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC170Q8IYT3 715 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 KCTD17Q8N5Z5 321 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 PKD1L3Q7Z443 1732 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 BCL9O00512 1426 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 IDH1O75874 414 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ITGA6P23229 1130 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 GCKP35557 465 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 LONRF3Q496Y0 759 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC82Q8N4S0 544 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 OR8K1Q8NGG5 319 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 SELENOSQ9BQE4 189 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ZHX3Q9H4I2 956 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 CNNM1Q9NRU3 951 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ZNF532Q9HCE3 1301 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 GSG1L2A8MUP6 293 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 MYO1CO00159 1063 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 IRS4O14654 1257 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 APBA1Q02410 837 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC96Q2M329 555 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ANKRD18AQ8IVF6 992 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 IFT81Q8WYA0 676 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 FUT8Q9BYC5 575 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 PUS3Q9BZE2 481 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 PDE11AQ9HCR9 933 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 LOC102724159A0A0B4J2E5 919 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 GCOM1H8Y6P7 765 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 MYZAPP0CAP1 466 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 GYS2P54840 703 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 NAA30Q147X3 362 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 PWP2Q15269 919 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 SF3B3Q15393 1217 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 TBC1D10CQ8IV04 446 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 INTS13Q9NVM9 706 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 KIF28PB7ZC32 967 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ACTN4O43707 911 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ANXA13P27216 316 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 RRAGBQ5VZM2 374 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 CACNA2D4Q7Z3S7 1137 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 KCPQ6ZWJ8 1503 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 USP27XA6NNY8 438 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 BMP6P22004 513 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 HPDP32754 393 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-205ENST00000397611 DNM2P50570 870 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 AMOTL1Q8IY63 956 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 SPATA5Q8NB90 893 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 DAGLBQ8NCG7 672 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 NUCKS1Q9H1E3 243 aaKnown RBP6.09□□□□□ -1.43
PTPRD-205ENST00000397611 SCN11AQ9UI33 1791 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 DISP2A7MBM2 1401 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 BCL9LQ86UU0 1499 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 AFMP43652 599 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 CATIPQ7Z7H3 387 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 LRRC27Q9C0I9 530 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 RWDD2AQ9UIY3 292 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 MROH7-TTC4A0A0A0MT08 1334 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 PSMD14O00487 310 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 PSMA7O14818 248 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 STX17P56962 302 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC152Q4G0S7 254 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 FAM114A1Q8IWE2 563 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 ZNF287Q9HBT7 754 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 TRMT112Q9UI30 125 aaKnown RBP6.09□□□□□ -1.43
PTPRD-205ENST00000397611 ADAMTSL3P82987 1691 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 M0R2C6 588 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 IGHMBP2P38935 993 aaKnown RBP6.09□□□□□ -1.43
PTPRD-205ENST00000397611 AARSP49588 968 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPRD-205ENST00000397611 LONRF2Q1L5Z9 754 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 ICE2Q659A1 982 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 OTUD7BQ6GQQ9 843 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 DHTKD1Q96HY7 919 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-205ENST00000397611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPRD-205ENST00000397611 LRP5O75197 1615 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 AK9Q5TCS8 1911 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 GNGT1P63211 74 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 SCARF1Q14162 830 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 TMTC3Q6ZXV5 915 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 B4GALNT4Q76KP1 1039 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 CPLX4Q7Z7G2 160 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 ZSWIM5Q9P217 1185 aa6.09□□□□□ -1.43
PTPRD-205ENST00000397611 LTN1O94822 1766 aa6.09□□□□□ -1.44
PTPRD-205ENST00000397611 TMCO5BA8MYB1 307 aa6.09□□□□□ -1.44
PTPRD-205ENST00000397611 TULP2O00295 520 aa6.09□□□□□ -1.44
PTPRD-205ENST00000397611 RAD51AP2Q09MP3 1159 aa6.09□□□□□ -1.44
PTPRD-205ENST00000397611 SLC10A5Q5PT55 438 aa6.09□□□□□ -1.44
PTPRD-205ENST00000397611 NAPGQ99747 312 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-205ENST00000397611 NBPF3Q9H094 633 aa6.09□□□□□ -1.44
PTPRD-205ENST00000397611 GPHNQ9NQX3 736 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-205ENST00000397611 LRP6O75581 1613 aa6.09□□□□□ -1.44
PTPRD-205ENST00000397611 ANKRD65E5RJM6 399 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 RANBP6O60518 1105 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms