RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 CTAGE9A4FU28 777 aa17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 UBA7P41226 1012 aa17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 NEK11Q8NG66 645 aa17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 BRIP1Q9BX63 1249 aa17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 VAT1LQ9HCJ6 419 aa17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 RCAN1P53805 252 aa17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 SMC1AQ14683 1233 aaKnown RBP17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 NBPF5PQ86XG9 351 aaPredicted RBP17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 BSDC1Q9NW68 430 aaPredicted RBP17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 TFR2Q9UP52 801 aa17.95■□□□□ 0.46
ATP2A3-206ENST00000397043 RNF225M0QZC1 329 aaPredicted RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 DDAH1O94760 285 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 RPN1P04843 607 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 RPS8P62241 208 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 INF2Q27J81 1249 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 APTXQ7Z2E3 356 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 MTA3Q9BTC8 594 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 SAP30BPQ9UHR5 308 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 LRP6O75581 1613 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 USP17L3A6NCW0 530 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 USP17L4A6NCW7 530 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 KIF5BP33176 963 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 COPB1P53618 953 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 IL17AQ16552 155 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 WWC2Q6AWC2 1192 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 USP17L1Q7RTZ2 530 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 TRIM47Q96LD4 638 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 ANKIB1Q9P2G1 1089 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 SRP68Q9UHB9 627 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
ATP2A3-206ENST00000397043 BAZ2AQ9UIF9 1905 aaKnown RBP17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 CCDC66A2RUB6 948 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 ZRANB2O95218 330 aaKnown RBP eCLIP17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 PRCPP42785 496 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 NPY5RQ15761 445 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 JAKMIP3Q5VZ66 844 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 TXNRD3Q86VQ6 643 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 SLC44A5Q8NCS7 719 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 MTRQ99707 1265 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 ERCC3P19447 782 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 CDKAL1Q5VV42 579 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 DTHD1Q6ZMT9 781 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 SH3RF1Q7Z6J0 888 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 SLC51AQ86UW1 340 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 BLIDQ8IZY5 108 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 PNMA1Q8ND90 353 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 NLRP3Q96P20 1036 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 ENC1O14682 589 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 TBC1D9BQ66K14 1250 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 RABGGTAQ92696 567 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 CHP1Q99653 195 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 TRIM10Q9UDY6 481 aa17.93■□□□□ 0.46
ATP2A3-206ENST00000397043 DIXDC1Q155Q3 683 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 ABHD10Q9NUJ1 306 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 FAM205AQ6ZU69 1335 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 ITGB4P16144 1822 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 COL1A1P02452 1464 aaPredicted RBP17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 GTPBP6O43824 516 aaPredicted RBP17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 TSPY3P0CV98 308 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 TSPY8P0CW00 308 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 ERVK-24P63145 666 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 TCP11X2Q5H9J9 407 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 NAA15Q9BXJ9 866 aaKnown RBP17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 SUGCTQ9HAC7 445 aa17.92■□□□□ 0.46
ATP2A3-206ENST00000397043 ST5P78524 1137 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 PFKFB3Q16875 520 aaPredicted RBP17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 LONRF2Q1L5Z9 754 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 RASGRP2Q7LDG7 609 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 MAGEC2Q9UBF1 373 aaPredicted RBP17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 NID2Q14112 1375 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 CHD4Q14839 1912 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 PHACTR2O75167 634 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 CCDC178Q5BJE1 867 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 SETDB2Q96T68 719 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 CDC23Q9UJX2 597 aa17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 ZNF444Q8N0Y2 327 aaPredicted RBP17.91■□□□□ 0.46
ATP2A3-206ENST00000397043 ECM29Q5VYK3 1845 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 LETM2Q2VYF4 491 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 CYP26C1Q6V0L0 522 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 TMTC1Q8IUR5 882 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 TNFRSF25Q93038 417 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 CAPZA3Q96KX2 299 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 RMND1Q9NWS8 449 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 FAM53CQ9NYF3 392 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 CALML3P27482 149 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 SPAG1Q07617 926 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 ZNF658Q5TYW1 1059 aaPredicted RBP17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 PDXDC2PQ6P474 469 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 RSRC2Q7L4I2 434 aaKnown RBP17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 TGFBRAP1Q8WUH2 860 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 HINFPQ9BQA5 517 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 TMEM60Q9H2L4 133 aa17.9■□□□□ 0.46
ATP2A3-206ENST00000397043 RWDD2AQ9UIY3 292 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms