RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 RRP15Q9Y3B9 282 aaKnown RBP13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SAMM50Q9Y512 469 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 GNAQP50148 359 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SP4Q02446 784 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 TXNRD3Q86VQ6 643 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 CEP112Q8N8E3 955 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 CHMP2AO43633 222 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 CYP2C19P33261 490 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 GRIN1Q05586 938 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 CEP89Q96ST8 783 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 POLD4Q9HCU8 107 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 ADAM21Q9UKJ8 722 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SCG2P13521 617 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 IFNAR1P17181 557 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 SNAP25P60880 206 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 POLR3EQ9NVU0 708 aa13.68□□□□□ -0.22
ITGA4-203ENST00000397033 RBM28Q9NW13 759 aaKnown RBP13.68□□□□□ -0.22
ITGA4-203ENST00000397033 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 RNF187Q5TA31 235 aaPredicted RBP13.67□□□□□ -0.22
ITGA4-203ENST00000397033 PSMB7Q99436 277 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 BSDC1Q9NW68 430 aaPredicted RBP13.67□□□□□ -0.22
ITGA4-203ENST00000397033 TMEM232C9JQI7 657 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 MMP1P03956 469 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 PDE4DQ08499 809 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
ITGA4-203ENST00000397033 NYAP1Q6ZVC0 841 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 MAEAQ7L5Y9 396 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 COA7Q96BR5 231 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 AKR1B15C9JRZ8 316 aaPredicted RBP13.67□□□□□ -0.22
ITGA4-203ENST00000397033 FMNL1O95466 1100 aaPredicted RBP13.67□□□□□ -0.22
ITGA4-203ENST00000397033 MAP9Q49MG5 647 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 MXD3Q9BW11 206 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
ITGA4-203ENST00000397033 PSMA7O14818 248 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 TSGA10IPQ3SY00 556 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.66□□□□□ -0.22
ITGA4-203ENST00000397033 E2F4Q16254 413 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 NRXN3Q9Y4C0 1643 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 KCTD1Q719H9 257 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 BLIDQ8IZY5 108 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 SCAF8Q9UPN6 1271 aaKnown RBP13.66□□□□□ -0.22
ITGA4-203ENST00000397033 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
ITGA4-203ENST00000397033 PP2D1A8MPX8 630 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 AKR1B10O60218 316 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 DCCP43146 1447 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 PRKG1Q13976 671 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 WDR78Q5VTH9 848 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 ADGRA1Q86SQ6 560 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 NELFCDQ8IXH7 590 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 PEAK1Q9H792 1746 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 DCP1AQ9NPI6 582 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-203ENST00000397033 TCHHQ07283 1943 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 SYNRGQ9UMZ2 1314 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 EVX2Q03828 476 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 SPECC1LQ69YQ0 1117 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 CC2D1AQ6P1N0 951 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-203ENST00000397033 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-203ENST00000397033 RGPD8O14715 1765 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-203ENST00000397033 USP8P40818 1118 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 SLC1A4P43007 532 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 PLA2G4AP47712 749 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-203ENST00000397033 FMR1NBQ8N0W7 255 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-203ENST00000397033 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 GOLGA5Q8TBA6 731 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 IGDCC4Q8TDY8 1250 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-203ENST00000397033 PXDNLA1KZ92 1463 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 CDHR2Q9BYE9 1310 aa13.65□□□□□ -0.22
ITGA4-203ENST00000397033 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 SPA17Q15506 151 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 GNA11P29992 359 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 ACTN2P35609 894 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
ITGA4-203ENST00000397033 KRT79Q5XKE5 535 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 DPF2Q92785 391 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
ITGA4-203ENST00000397033 ZEB2O60315 1214 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 NTSR2O95665 410 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 LIFRP42702 1097 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 PTPROQ16827 1216 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
ITGA4-203ENST00000397033 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
ITGA4-203ENST00000397033 FEZ2Q9UHY8 353 aaPredicted RBP13.64□□□□□ -0.23
ITGA4-203ENST00000397033 BMP15O95972 392 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms