RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 MCM5P33992 734 aa34.49■■■■□ 3.11
CHCHD4-202ENST00000396914 FBXO28Q9NVF7 368 aa34.49■■■■□ 3.11
CHCHD4-202ENST00000396914 SPDYE16A6NNV3 312 aaPredicted RBP34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 PEX10O60683 326 aa34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 EIF5BO60841 1220 aaKnown RBP34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 LACTBP83111 547 aaPredicted RBP34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 FAM110CQ1W6H9 321 aa34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 GMCL1Q96IK5 515 aa34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 NEK1Q96PY6 1258 aa34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 USP26Q9BXU7 913 aa34.48■■■■□ 3.11
CHCHD4-202ENST00000396914 PRC1O43663 620 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 TMEM67Q5HYA8 995 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 KCTD1Q719H9 257 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 PNMA1Q8ND90 353 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 EPB41L2O43491 1005 aaKnown RBP34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 DSG3P32926 999 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 ARHGEF6Q15052 776 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 RASGRP2Q7LDG7 609 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 GPRC5AQ8NFJ5 357 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 DCAF4Q8WV16 495 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 ATG4CQ96DT6 458 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 SLF1Q9BQI6 1058 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 RBPJLQ9UBG7 517 aa34.47■■■■□ 3.11
CHCHD4-202ENST00000396914 TMEM232C9JQI7 657 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 ANTXR2P58335 489 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 WTAPQ15007 396 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 CCAR1Q8IX12 1150 aaKnown RBP34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 ANKS1AQ92625 1134 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 KIFC2Q96AC6 838 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 TXNRD2Q9NNW7 524 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 FEM1BQ9UK73 627 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 RABGAP1Q9Y3P9 1069 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 SNX14Q9Y5W7 946 aa34.46■■■■□ 3.11
CHCHD4-202ENST00000396914 FMNL1O95466 1100 aaPredicted RBP34.45■■■■□ 3.11
CHCHD4-202ENST00000396914 TSGA10IPQ3SY00 556 aa34.45■■■■□ 3.11
CHCHD4-202ENST00000396914 ARHGAP39Q9C0H5 1083 aa34.45■■■■□ 3.11
CHCHD4-202ENST00000396914 PPP1R9AQ9ULJ8 1098 aa34.45■■■■□ 3.11
CHCHD4-202ENST00000396914 CTDP1Q9Y5B0 961 aaPredicted RBP34.45■■■■□ 3.11
CHCHD4-202ENST00000396914 FRMPD2Q68DX3 1309 aaPredicted RBP34.44■■■■□ 3.1
CHCHD4-202ENST00000396914 MYPNQ86TC9 1320 aa34.44■■■■□ 3.1
CHCHD4-202ENST00000396914 PSMC4P43686 418 aa34.44■■■■□ 3.1
CHCHD4-202ENST00000396914 SEC23AQ15436 765 aa34.44■■■■□ 3.1
CHCHD4-202ENST00000396914 ADCK5Q3MIX3 580 aa34.44■■■■□ 3.1
CHCHD4-202ENST00000396914 MORF4L1Q9UBU8 362 aa34.44■■■■□ 3.1
CHCHD4-202ENST00000396914 TRIM17Q9Y577 477 aa34.44■■■■□ 3.1
CHCHD4-202ENST00000396914 ERVK-9P63128 1117 aa34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 ERVK-24P63145 666 aa34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 PLS1Q14651 629 aa34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 COL13A1Q5TAT6 717 aaPredicted RBP34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 LBX2Q6XYB7 198 aa34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 PRPF38AQ8NAV1 312 aaKnown RBP34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 JAKMIP1Q96N16 626 aaKnown RBP34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 EFCC1Q9HA90 598 aa34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 GPCPD1Q9NPB8 672 aa34.43■■■■□ 3.1
CHCHD4-202ENST00000396914 PDHBP11177 359 aa34.42■■■■□ 3.1
CHCHD4-202ENST00000396914 STAT2P52630 851 aa34.42■■■■□ 3.1
CHCHD4-202ENST00000396914 FCGRTP55899 365 aa34.42■■■■□ 3.1
CHCHD4-202ENST00000396914 CTU1Q7Z7A3 348 aaKnown RBP34.42■■■■□ 3.1
CHCHD4-202ENST00000396914 CHURC1Q8WUH1 139 aa34.42■■■■□ 3.1
CHCHD4-202ENST00000396914 CWC22Q9HCG8 908 aaKnown RBP34.42■■■■□ 3.1
CHCHD4-202ENST00000396914 BTBD7Q9P203 1132 aa34.42■■■■□ 3.1
CHCHD4-202ENST00000396914 POTEEQ6S8J3 1075 aa34.41■■■■□ 3.1
CHCHD4-202ENST00000396914 MB21D1Q8N884 522 aa34.41■■■■□ 3.1
CHCHD4-202ENST00000396914 KCNB2Q92953 911 aa34.41■■■■□ 3.1
CHCHD4-202ENST00000396914 TMEM87BQ96K49 555 aa34.41■■■■□ 3.1
CHCHD4-202ENST00000396914 LRRC2Q9BYS8 371 aa34.41■■■■□ 3.1
CHCHD4-202ENST00000396914 CCNA1P78396 465 aa34.4■■■■□ 3.1
CHCHD4-202ENST00000396914 COL9A3Q14050 684 aaPredicted RBP34.4■■■■□ 3.1
CHCHD4-202ENST00000396914 Q3C1V9 767 aa34.4■■■■□ 3.1
CHCHD4-202ENST00000396914 NFXL1Q6ZNB6 911 aa34.4■■■■□ 3.1
CHCHD4-202ENST00000396914 FAM160B2Q86V87 743 aa34.4■■■■□ 3.1
CHCHD4-202ENST00000396914 IGDCC4Q8TDY8 1250 aa34.4■■■■□ 3.1
CHCHD4-202ENST00000396914 CNMDO75829 334 aa34.39■■■■□ 3.1
CHCHD4-202ENST00000396914 HMGB1P09429 215 aaKnown RBP34.39■■■■□ 3.1
CHCHD4-202ENST00000396914 SENP2Q9HC62 589 aa34.39■■■■□ 3.1
CHCHD4-202ENST00000396914 VWA5AO00534 786 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 TNPO2O14787 897 aaKnown RBP34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 ZBED4O75132 1171 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 C8orf34Q49A92 452 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 WDR78Q5VTH9 848 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 DHX32Q7L7V1 743 aaKnown RBP34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 TRIM47Q96LD4 638 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 GPHNQ9NQX3 736 aaPredicted RBP34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 RLFQ13129 1914 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 ZSWIM8A7E2V4 1837 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 PARP14Q460N5 1801 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 SEC24BO95487 1268 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 GOLGA8HP0CJ92 632 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 CTGFP29279 349 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 FGD1P98174 961 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 CAP1Q01518 475 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 OTOP1Q7RTM1 612 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 TCEANC2Q96MN5 208 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 MTA3Q9BTC8 594 aa34.38■■■■□ 3.09
CHCHD4-202ENST00000396914 PSMA5P28066 241 aa34.37■■■■□ 3.09
CHCHD4-202ENST00000396914 SLC16A2P36021 539 aa34.37■■■■□ 3.09
CHCHD4-202ENST00000396914 ZNF543Q08ER8 600 aa34.37■■■■□ 3.09
CHCHD4-202ENST00000396914 TTBK2Q6IQ55 1244 aa34.37■■■■□ 3.09
CHCHD4-202ENST00000396914 BLOC1S2Q6QNY1 142 aa34.37■■■■□ 3.09
CHCHD4-202ENST00000396914 CATIPQ7Z7H3 387 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms