RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CASP14P31944 242 aa15.08■□□□□ 0
TRIM40-207ENST00000396581 ACTN2P35609 894 aa15.08■□□□□ 0
TRIM40-207ENST00000396581 FXR1P51114 621 aaKnown RBP eCLIP15.08■□□□□ 0
TRIM40-207ENST00000396581 MAP3K12Q12852 859 aa15.08■□□□□ 0
TRIM40-207ENST00000396581 ZNF569Q5MCW4 686 aa15.08■□□□□ 0
TRIM40-207ENST00000396581 SPATA5Q8NB90 893 aa15.08■□□□□ 0
TRIM40-207ENST00000396581 TRIM75PA6NK02 468 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 ARHGAP25P42331 645 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 AMPD2Q01433 879 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 TXNRD1Q16881 649 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 ZNF654Q8IZM8 581 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 MAGEB6Q8N7X4 407 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 PHF20Q9BVI0 1012 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 CWC15Q9P013 229 aaKnown RBP15.07■□□□□ 0
TRIM40-207ENST00000396581 PUF60Q9UHX1 559 aaKnown RBP15.07■□□□□ 0
TRIM40-207ENST00000396581 COL24A1Q17RW2 1714 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 EIF3JO75822 258 aaKnown RBP15.07■□□□□ 0
TRIM40-207ENST00000396581 ERVK-24P63145 666 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 SEC23AQ15436 765 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 WDR93Q6P2C0 686 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 SLC35F6Q8N357 371 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 EPSTI1Q96J88 318 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 NAPGQ99747 312 aaPredicted RBP15.07■□□□□ 0
TRIM40-207ENST00000396581 ARMT1Q9H993 441 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 PDE11AQ9HCR9 933 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 ABCB6Q9NP58 842 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 ABHD10Q9NUJ1 306 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
TRIM40-207ENST00000396581 FUT2Q10981 343 aa15.06■□□□□ 0
TRIM40-207ENST00000396581 TRIM14Q14142 442 aa15.06■□□□□ 0
TRIM40-207ENST00000396581 PKN1Q16512 942 aa15.06■□□□□ 0
TRIM40-207ENST00000396581 KIF4BQ2VIQ3 1234 aa15.06■□□□□ 0
TRIM40-207ENST00000396581 HELBQ8NG08 1087 aaPredicted RBP15.06■□□□□ 0
TRIM40-207ENST00000396581 SYMPKQ92797 1274 aaKnown RBP15.06■□□□□ 0
TRIM40-207ENST00000396581 NLRP3Q96P20 1036 aa15.06■□□□□ 0
TRIM40-207ENST00000396581 GBP3Q9H0R5 595 aa15.06■□□□□ 0
TRIM40-207ENST00000396581 RNF41Q9H4P4 317 aaPredicted RBP15.06■□□□□ 0
TRIM40-207ENST00000396581 ZSWIM4Q9H7M6 989 aa15.06■□□□□ 0
TRIM40-207ENST00000396581 BSDC1Q9NW68 430 aaPredicted RBP15.06■□□□□ 0
TRIM40-207ENST00000396581 ERICH2A1L162 156 aa15.05■□□□□ 0
TRIM40-207ENST00000396581 GYS2P54840 703 aa15.05■□□□□ 0
TRIM40-207ENST00000396581 RASGRF1Q13972 1273 aa15.05■□□□□ 0
TRIM40-207ENST00000396581 NFIXQ14938 502 aa15.05■□□□□ 0
TRIM40-207ENST00000396581 TNFRSF25Q93038 417 aa15.05■□□□□ 0
TRIM40-207ENST00000396581 NACAP1Q9BZK3 213 aa15.05■□□□□ 0
TRIM40-207ENST00000396581 UBR3Q6ZT12 1888 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 XBP1P17861 261 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 AFMP43652 599 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 LMAN1P49257 510 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 STX17P56962 302 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 E2F4Q16254 413 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 ANKRD18AQ8IVF6 992 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 CPLX3Q8WVH0 158 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 RWDD2AQ9UIY3 292 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 ANAPC4Q9UJX5 808 aa15.05■□□□□ -0
TRIM40-207ENST00000396581 CTAGE15A4D2H0 777 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 PRPF3O43395 683 aaKnown RBP15.04■□□□□ -0
TRIM40-207ENST00000396581 PRKAB2O43741 272 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 CTAGE8P0CG41 777 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 GYS1P13807 737 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 SLC5A1P13866 664 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 KRT2P35908 639 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 VSNL1P62760 191 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 CHRNDQ07001 517 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 SPAG1Q07617 926 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 MCM6Q14566 821 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 KRT31Q15323 416 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 EARS2Q5JPH6 523 aaKnown RBP15.04■□□□□ -0
TRIM40-207ENST00000396581 KLHL10Q6JEL2 608 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 CYP26C1Q6V0L0 522 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 CTAGE6Q86UF2 777 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 CTAGE4Q8IX94 777 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 CMTR1Q8N1G2 835 aaKnown RBP15.04■□□□□ -0
TRIM40-207ENST00000396581 LCORLQ8N3X6 602 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 ACRBPQ8NEB7 543 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 ZKSCAN3Q9BRR0 538 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 IQSEC3Q9UPP2 1182 aaPredicted RBP15.04■□□□□ -0
TRIM40-207ENST00000396581 XDHP47989 1333 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 FAM205CA6NFA0 338 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 CASP8Q14790 479 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 SRLQ86TD4 932 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 FAM71BQ8TC56 605 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 VPS18Q9P253 973 aa15.04■□□□□ -0
TRIM40-207ENST00000396581 RGS17Q9UGC6 210 aaPredicted RBP15.04■□□□□ -0
TRIM40-207ENST00000396581 MYO1CO00159 1063 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 ABL1P00519 1130 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 IVLP07476 585 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 CASP1P29466 404 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 TDO2P48775 406 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 ATP2C1P98194 919 aaPredicted RBP15.03■□□□□ -0
TRIM40-207ENST00000396581 NPY5RQ15761 445 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 SMYD4Q8IYR2 804 aaPredicted RBP15.03■□□□□ -0
TRIM40-207ENST00000396581 CCDC82Q8N4S0 544 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 PYM1Q9BRP8 204 aaKnown RBP15.03■□□□□ -0
TRIM40-207ENST00000396581 VIPAS39Q9H9C1 493 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 SLC4A4Q9Y6R1 1079 aa15.03■□□□□ -0
TRIM40-207ENST00000396581 RNF225M0QZC1 329 aaPredicted RBP15.02■□□□□ -0
TRIM40-207ENST00000396581 WNT7AO00755 349 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 ATP2B1P20020 1258 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 TM4SF1P30408 202 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms