RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 L2HGDHQ9H9P8 463 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 JAK2O60674 1132 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 VIL1P09327 827 aaKnown RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 RASA1P20936 1047 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 KCNJ6P48051 423 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 SARSP49591 514 aaKnown RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 MDM2Q00987 491 aaPredicted RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 FAM160A1Q05DH4 1040 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 CCDC144BQ3MJ40 725 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 MOXD1Q6UVY6 613 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 LRRC8AQ8IWT6 810 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 CCDC144CPQ8IYA2 1237 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 TXLNBQ8N3L3 684 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 TRIML1Q8N9V2 468 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 CBX8Q9HC52 389 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 IL17RBQ9NRM6 502 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 SSUH2Q9Y2M2 353 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 PARP3Q9Y6F1 533 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 TNKSO95271 1327 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 USP27XA6NNY8 438 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 GOLGA8BA8MQT2 603 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 FIBPO43427 364 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 PNMA6AP0CW24 399 aaPredicted RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 GYS2P54840 703 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 MAP3K11Q16584 847 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 CCDC93Q567U6 631 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 TMEM67Q5HYA8 995 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 CHADLQ6NUI6 762 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 NECAB1Q8N987 351 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 KCNN1Q92952 543 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 RASSF4Q9H2L5 321 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 MAGEF1Q9HAY2 307 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 AATFQ9NY61 560 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS41-203ENST00000395969 SLC12A7Q9Y666 1083 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 SIP14410 1827 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 SCN4AP35499 1836 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 WDHD1O75717 1129 aaPredicted RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 PTPREP23469 700 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 KIF5BP33176 963 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 CLK2P49760 499 aaKnown RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 ZNF280AP59817 542 aaPredicted RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 DNM1Q05193 864 aaKnown RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 PTPN14Q15678 1187 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 RTN1Q16799 776 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 APOBEC3HQ6NTF7 200 aaKnown RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 IQCA1Q86XH1 822 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 AGBL3Q8NEM8 1001 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 TMEM174Q8WUU8 243 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 FERMT2Q96AC1 680 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 SHISA4Q96DD7 197 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 GLT8D2Q9H1C3 349 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 NYAP2Q9P242 653 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 RSPH14Q9UHP6 348 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 MAD2L2Q9UI95 211 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 DAGLAQ9Y4D2 1042 aa6.12□□□□□ -1.43
VPS41-203ENST00000395969 SRPRBQ9Y5M8 271 aaKnown RBP6.12□□□□□ -1.43
VPS41-203ENST00000395969 TESPA1A2RU30 521 aaPredicted RBP6.11□□□□□ -1.43
VPS41-203ENST00000395969 B4E1Z4 1266 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 KIF2AO00139 706 aaPredicted RBP6.11□□□□□ -1.43
VPS41-203ENST00000395969 PRKAB2O43741 272 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 CALML3P27482 149 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 PRDX5P30044 214 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 CLCN6P51797 869 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 ANO1Q5XXA6 986 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 POTEAQ6S8J7 498 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 NOSTRINQ8IVI9 506 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 C4orf32Q8N8J7 132 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 JMYQ8N9B5 988 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 HELBQ8NG08 1087 aaPredicted RBP6.11□□□□□ -1.43
VPS41-203ENST00000395969 CRYGNQ8WXF5 182 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 C8orf76Q96K31 380 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 ZMYND12Q9H0C1 365 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 CLIP2Q9UDT6 1046 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 CD2APQ9Y5K6 639 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 IKBKBO14920 756 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 RPS12P25398 132 aaKnown RBP6.11□□□□□ -1.43
VPS41-203ENST00000395969 CCZ1BP86790 482 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 CCZ1P86791 482 aaPredicted RBP6.11□□□□□ -1.43
VPS41-203ENST00000395969 ANO6Q4KMQ2 910 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 ASPRV1Q53RT3 343 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 C10orf67Q8IYJ2 551 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 CERS5Q8N5B7 392 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 GMCL1Q96IK5 515 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 ORC3Q9UBD5 711 aaPredicted RBP6.11□□□□□ -1.43
VPS41-203ENST00000395969 CEP131Q9UPN4 1083 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 ZNF236Q9UL36 1845 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 PTPRFP10586 1907 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 FRMPD4Q14CM0 1322 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 OTOFQ9HC10 1997 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 SSC5DA1L4H1 1573 aa6.11□□□□□ -1.43
VPS41-203ENST00000395969 TRIM66O15016 1216 aa6.1□□□□□ -1.43
VPS41-203ENST00000395969 ATP8B1O43520 1251 aa6.1□□□□□ -1.43
VPS41-203ENST00000395969 UFL1O94874 794 aa6.1□□□□□ -1.43
VPS41-203ENST00000395969 TOP1P11387 765 aaKnown RBP6.1□□□□□ -1.43
VPS41-203ENST00000395969 IARSP41252 1262 aaKnown RBP6.1□□□□□ -1.43
VPS41-203ENST00000395969 TDO2P48775 406 aa6.1□□□□□ -1.43
VPS41-203ENST00000395969 PSEN1P49768 467 aa6.1□□□□□ -1.43
VPS41-203ENST00000395969 TOB1P50616 345 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms