RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PIBF1Q8WXW3 757 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 SH2D4AQ9H788 454 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 GPCPD1Q9NPB8 672 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 ISY1Q9ULR0 285 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 FZD1Q9UP38 647 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 TMX2Q9Y320 296 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 TCHHQ07283 1943 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 BAG4O95429 457 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 SLC1A4P43007 532 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 CLEC17AQ6ZS10 378 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 SCYL3Q8IZE3 742 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 CPVLQ9H3G5 476 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 GOPCQ9HD26 462 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 CLEC11AQ9Y240 323 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 CYTH3O43739 400 aa23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 XBP1P17861 261 aa23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 PRKG1Q13976 671 aa23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 FOXD4L6Q3SYB3 417 aaPredicted RBP23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 KRT40Q6A162 431 aa23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 FOXD4L3Q6VB84 417 aaPredicted RBP23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 KCTD1Q719H9 257 aa23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 KLRG1Q96E93 195 aa23.62■■□□□ 1.37
VCPKMT-202ENST00000395860 NDUFB10O96000 172 aa23.61■■□□□ 1.37
VCPKMT-202ENST00000395860 SLC35G1Q2M3R5 365 aa23.61■■□□□ 1.37
VCPKMT-202ENST00000395860 CCDC84Q86UT8 332 aaPredicted RBP23.61■■□□□ 1.37
VCPKMT-202ENST00000395860 UBA5Q9GZZ9 404 aa23.61■■□□□ 1.37
VCPKMT-202ENST00000395860 ZSCAN16Q9H4T2 348 aaPredicted RBP23.61■■□□□ 1.37
VCPKMT-202ENST00000395860 RRAGCQ9HB90 399 aa23.61■■□□□ 1.37
VCPKMT-202ENST00000395860 SCG2P13521 617 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 VEGFAP15692 232 aaPredicted RBP23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 NF2P35240 595 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 PFKFB3Q16875 520 aaPredicted RBP23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 ZKSCAN4Q969J2 545 aaPredicted RBP23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 CDCA5Q96FF9 252 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 GMCL1Q96IK5 515 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 PICK1Q9NRD5 415 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 PPP1R12BO60237 982 aaPredicted RBP23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 RESTQ13127 1097 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 RRP36Q96EU6 259 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 FEZ1Q99689 392 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 GLIS2Q9BZE0 524 aaPredicted RBP23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 RIOX1Q9H6W3 641 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 VAT1LQ9HCJ6 419 aa23.6■■□□□ 1.37
VCPKMT-202ENST00000395860 OTOFQ9HC10 1997 aa23.59■■□□□ 1.37
VCPKMT-202ENST00000395860 USP2O75604 605 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-202ENST00000395860 TTBK2Q6IQ55 1244 aa23.59■■□□□ 1.37
VCPKMT-202ENST00000395860 ZYXQ15942 572 aaKnown RBP23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 SPICE1Q8N0Z3 855 aa23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 CHAMP1Q96JM3 812 aa23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 VCPKMTQ9H867 229 aa23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 VPS54Q9P1Q0 977 aa23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 SEC63Q9UGP8 760 aaKnown RBP23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 PHIPQ8WWQ0 1821 aa23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 PAPPA2Q9BXP8 1791 aa23.58■■□□□ 1.37
VCPKMT-202ENST00000395860 BMP3P12645 472 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 MCM4P33991 863 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 HOMER1Q86YM7 354 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 NUP88Q99567 741 aaPredicted RBP23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 AS3MTQ9HBK9 375 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 KCNJ14Q9UNX9 436 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 GOLGA6L22H0YM25 854 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 MMP1P03956 469 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 POTEIP0CG38 1075 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 POTEJP0CG39 1038 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 SLC16A2P36021 539 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 SAFBQ15424 915 aaKnown RBP eCLIP23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 NOL9Q5SY16 702 aaKnown RBP23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 PIGSQ96S52 555 aa23.57■■□□□ 1.36
VCPKMT-202ENST00000395860 PTPRAP18433 802 aa23.56■■□□□ 1.36
VCPKMT-202ENST00000395860 GNL2Q13823 731 aaKnown RBP23.56■■□□□ 1.36
VCPKMT-202ENST00000395860 ADGRF4Q8IZF3 695 aa23.56■■□□□ 1.36
VCPKMT-202ENST00000395860 IREB2P48200 963 aaKnown RBP23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 MAP3K9P80192 1104 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 KIF23Q02241 960 aaPredicted RBP23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 KIAA1755Q5JYT7 1200 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 GPKOWQ92917 476 aaPredicted RBP eCLIP23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 DDX11L8A8MPP1 907 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 TMEM232C9JQI7 657 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 DNM1Q05193 864 aaKnown RBP23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 IKQ13123 557 aaPredicted RBP23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 FAM173BQ6P4H8 233 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 KIAA1683Q9H0B3 1180 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 JMJD4Q9H9V9 463 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 SH3GLB2Q9NR46 395 aa23.55■■□□□ 1.36
VCPKMT-202ENST00000395860 USP17L10C9JJH3 530 aa23.54■■□□□ 1.36
VCPKMT-202ENST00000395860 TTLL12Q14166 644 aaPredicted RBP23.54■■□□□ 1.36
VCPKMT-202ENST00000395860 MAP1SQ66K74 1059 aaPredicted RBP23.54■■□□□ 1.36
VCPKMT-202ENST00000395860 HEATR3Q7Z4Q2 680 aa23.54■■□□□ 1.36
VCPKMT-202ENST00000395860 SHISA4Q96DD7 197 aa23.54■■□□□ 1.36
VCPKMT-202ENST00000395860 WDR18Q9BV38 432 aa23.54■■□□□ 1.36
VCPKMT-202ENST00000395860 PHF20Q9BVI0 1012 aa23.54■■□□□ 1.36
VCPKMT-202ENST00000395860 KIF28PB7ZC32 967 aa23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 NCLP19338 710 aaKnown RBP23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 NBR1Q14596 966 aa23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 FAM83BQ5T0W9 1011 aa23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 WWC2Q6AWC2 1192 aa23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 BRAPQ7Z569 592 aa23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 ZNF526Q8TF50 670 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms