RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 COBLO75128 1261 aa7.82□□□□□ -1.16
AP3S1-202ENST00000395548 GADD45BO75293 160 aaPredicted RBP7.82□□□□□ -1.16
AP3S1-202ENST00000395548 TIAF1O95411 115 aa7.82□□□□□ -1.16
AP3S1-202ENST00000395548 IGHA2P01877 340 aa7.82□□□□□ -1.16
AP3S1-202ENST00000395548 ITPKAP23677 461 aa7.82□□□□□ -1.16
AP3S1-202ENST00000395548 MAP4P27816 1152 aaKnown RBP7.82□□□□□ -1.16
AP3S1-202ENST00000395548 CSRNP1Q96S65 589 aa7.82□□□□□ -1.16
AP3S1-202ENST00000395548 USP54Q70EL1 1684 aa7.82□□□□□ -1.16
AP3S1-202ENST00000395548 CPSF1Q10570 1443 aaKnown RBP7.81□□□□□ -1.16
AP3S1-202ENST00000395548 DLGAP3O95886 979 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 B3GALT4O96024 378 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 MAOBP27338 520 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 SSTR4P31391 388 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 GRIK1P39086 918 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 USP11P51784 963 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 GRM1Q13255 1194 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 POU4F3Q15319 338 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 SMIM5Q71RC9 77 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 ARHGEF25Q86VW2 580 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 ZDHHC13Q8IUH4 622 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 KCNH5Q8NCM2 988 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 GIMAP7Q8NHV1 300 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 NRSN2Q9GZP1 204 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 ZNF576Q9H609 170 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 NLRP2Q9NX02 1062 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 SBF1O95248 1867 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 KIAA1551Q9HCM1 1747 aa7.81□□□□□ -1.16
AP3S1-202ENST00000395548 TMF1P82094 1093 aa7.8□□□□□ -1.16
AP3S1-202ENST00000395548 SOX4Q06945 474 aaPredicted RBP7.8□□□□□ -1.16
AP3S1-202ENST00000395548 RGL3Q3MIN7 710 aa7.8□□□□□ -1.16
AP3S1-202ENST00000395548 PRPF40BQ6NWY9 871 aaKnown RBP7.8□□□□□ -1.16
AP3S1-202ENST00000395548 INTS5Q6P9B9 1019 aaKnown RBP7.8□□□□□ -1.16
AP3S1-202ENST00000395548 AEBP1Q8IUX7 1158 aa7.8□□□□□ -1.16
AP3S1-202ENST00000395548 CORO1BQ9BR76 489 aa7.8□□□□□ -1.16
AP3S1-202ENST00000395548 YIPF2Q9BWQ6 316 aa7.8□□□□□ -1.16
AP3S1-202ENST00000395548 THSD7BQ9C0I4 1608 aa7.8□□□□□ -1.16
AP3S1-202ENST00000395548 CASP8AP2Q9UKL3 1982 aa7.8□□□□□ -1.16
AP3S1-202ENST00000395548 QRICH2Q9H0J4 1663 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 TGFB1P01137 390 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 CD97P48960 835 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 RPS26P11Q5JNZ5 115 aaPredicted RBP7.79□□□□□ -1.16
AP3S1-202ENST00000395548 CYP4F22Q6NT55 531 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 NSD2O96028 1365 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 SZT2Q5T011 3432 aa7.79□□□□□ -1.16
AP3S1-202ENST00000395548 FAM95CA0A1B0GW59 222 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 DRD2P14416 443 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 AP3B2Q13367 1082 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 PAOXQ6QHF9 649 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 TMC7Q7Z402 723 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 CNTROBQ8N137 903 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 SHKBP1Q8TBC3 707 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 ABCB6Q9NP58 842 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 RAD18Q9NS91 495 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 C5P01031 1676 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 BRCA1P38398 1863 aaKnown RBP7.78□□□□□ -1.16
AP3S1-202ENST00000395548 LTBP1Q14766 1721 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 SLIT3O75094 1523 aa7.78□□□□□ -1.16
AP3S1-202ENST00000395548 MAPK1P28482 360 aa7.77□□□□□ -1.17
AP3S1-202ENST00000395548 PLCB3Q01970 1234 aa7.77□□□□□ -1.17
AP3S1-202ENST00000395548 PKN2Q16513 984 aaKnown RBP7.77□□□□□ -1.17
AP3S1-202ENST00000395548 EAPPQ56P03 285 aaPredicted RBP7.77□□□□□ -1.17
AP3S1-202ENST00000395548 TMCO4Q5TGY1 634 aa7.77□□□□□ -1.17
AP3S1-202ENST00000395548 PNMA8AQ86V59 439 aaPredicted RBP7.77□□□□□ -1.17
AP3S1-202ENST00000395548 C2CD4AQ8NCU7 369 aaPredicted RBP7.77□□□□□ -1.17
AP3S1-202ENST00000395548 RGS22Q8NE09 1264 aa7.77□□□□□ -1.17
AP3S1-202ENST00000395548 EPS8L3Q8TE67 593 aaKnown RBP7.77□□□□□ -1.17
AP3S1-202ENST00000395548 SMARCC1Q92922 1105 aaPredicted RBP7.77□□□□□ -1.17
AP3S1-202ENST00000395548 TAF1DQ9H5J8 278 aaPredicted RBP7.77□□□□□ -1.17
AP3S1-202ENST00000395548 WDR64B1ANS9 1081 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 ADH5P11766 374 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 GRM2Q14416 872 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 NFKBIBQ15653 356 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 CTU1Q7Z7A3 348 aaKnown RBP7.76□□□□□ -1.17
AP3S1-202ENST00000395548 AMIGO3Q86WK7 504 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 FBLIM1Q8WUP2 373 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 MFSD14AQ96MC6 490 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 DDX21Q9NR30 783 aaKnown RBP eCLIP7.76□□□□□ -1.17
AP3S1-202ENST00000395548 ATG3Q9NT62 314 aa7.76□□□□□ -1.17
AP3S1-202ENST00000395548 PALLDQ8WX93 1383 aa7.75□□□□□ -1.17
AP3S1-202ENST00000395548 MKI67P46013 3256 aaKnown RBP7.75□□□□□ -1.17
AP3S1-202ENST00000395548 MEGF6O75095 1541 aa7.75□□□□□ -1.17
AP3S1-202ENST00000395548 PRR19A6NJB7 356 aa7.75□□□□□ -1.17
AP3S1-202ENST00000395548 KIAA1324LA8MWY0 1029 aaPredicted RBP7.75□□□□□ -1.17
AP3S1-202ENST00000395548 AOC2O75106 756 aa7.75□□□□□ -1.17
AP3S1-202ENST00000395548 DDNO94850 711 aaPredicted RBP7.75□□□□□ -1.17
AP3S1-202ENST00000395548 XRCC5P13010 732 aaKnown RBP7.75□□□□□ -1.17
AP3S1-202ENST00000395548 HNRNPUQ00839 825 aaKnown RBP eCLIP7.75□□□□□ -1.17
AP3S1-202ENST00000395548 CDPF1Q6NVV7 123 aa7.75□□□□□ -1.17
AP3S1-202ENST00000395548 DTHD1Q6ZMT9 781 aa7.75□□□□□ -1.17
AP3S1-202ENST00000395548 TRIM56Q9BRZ2 755 aaKnown RBP7.75□□□□□ -1.17
AP3S1-202ENST00000395548 C4BP0C0L5 1744 aa7.75□□□□□ -1.17
AP3S1-202ENST00000395548 IGSF3O75054 1194 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 MED26O95402 600 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 CTSBP07858 339 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 KCNA1Q09470 495 aa7.74□□□□□ -1.17
AP3S1-202ENST00000395548 PDE3AQ14432 1141 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms