RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 GNPATO15228 680 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 A1BGP04217 495 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 PCP11498 1178 aaKnown RBP11.89□□□□□ -0.51
AFF1-202ENST00000395146 PDE6AP16499 860 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 TFAP4Q01664 338 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 PSMD1Q99460 953 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
AFF1-202ENST00000395146 TRPC3Q13507 836 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 SEPT6Q14141 434 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 GDAP1L1Q96MZ0 367 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 PKD2L1Q9P0L9 805 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 TBC1D7Q9P0N9 293 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 RIMBP2O15034 1052 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 RABEP2Q9H5N1 569 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 CLIC4Q9Y696 253 aa11.89□□□□□ -0.51
AFF1-202ENST00000395146 SMCO2A6NFE2 343 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 NLRC4Q9NPP4 1024 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 RPN1P04843 607 aaKnown RBP11.88□□□□□ -0.51
AFF1-202ENST00000395146 ITIH3Q06033 890 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 UBE3CQ15386 1083 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 GRK7Q8WTQ7 553 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 SCG2P13521 617 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 STAT1P42224 750 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 SMC1BQ8NDV3 1235 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 MLH3Q9UHC1 1453 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 KRIT1O00522 736 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 EIF6P56537 245 aaKnown RBP11.88□□□□□ -0.51
AFF1-202ENST00000395146 KCNG1Q9UIX4 513 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 KRT15P19012 456 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
AFF1-202ENST00000395146 SLC8A3P57103 927 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 CCDC38Q502W7 563 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 PHLDB2Q86SQ0 1253 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 TBC1D22AQ8WUA7 517 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
AFF1-202ENST00000395146 CAPN7Q9Y6W3 813 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 TNKSO95271 1327 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 CIAO1O76071 339 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 GUCY2FP51841 1108 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 ZNF827Q17R98 1081 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 IWS1Q96ST2 819 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 FOXP1Q9H334 677 aaPredicted RBP11.88□□□□□ -0.51
AFF1-202ENST00000395146 CUEDC2Q9H467 287 aa11.88□□□□□ -0.51
AFF1-202ENST00000395146 FGAP02671 866 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 OR52Z1P0C646 297 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 HSPA1LP34931 641 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 MAP2K2P36507 400 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 ARHGEF2Q92974 986 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 PDE11AQ9HCR9 933 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 VPS52Q8N1B4 723 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 SYMPKQ92797 1274 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 GMNNO75496 209 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 EEF1GP26641 437 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 ADD1P35611 737 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 COPB1P53618 953 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 MRPS9P82933 396 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 ZMYM1Q5SVZ6 1142 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 GABPB2Q8TAK5 448 aaPredicted RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 RAB3IPQ96QF0 476 aaPredicted RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 LAD1O00515 517 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 KCNK3O14649 394 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 STX2P32856 288 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 AFAP1L2Q8N4X5 818 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 PPANQ9NQ55 473 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 N4BP1O75113 896 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 DCUN1D2Q6PH85 259 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 PTCH1Q13635 1447 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 RNF10Q8N5U6 811 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 KLHL14Q9P2G3 628 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
AFF1-202ENST00000395146 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
AFF1-202ENST00000395146 C11orf57Q6ZUT1 292 aaPredicted RBP11.86□□□□□ -0.51
AFF1-202ENST00000395146 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 RBM26Q5T8P6 1007 aaKnown RBP11.86□□□□□ -0.51
AFF1-202ENST00000395146 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 SLC8A1P32418 973 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 NEK8Q86SG6 692 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 TMEM2Q9UHN6 1383 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 CASP14P31944 242 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 PPP1R21Q6ZMI0 780 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
AFF1-202ENST00000395146 NRBP1Q9UHY1 535 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 PCCAP05165 728 aaPredicted RBP11.86□□□□□ -0.51
AFF1-202ENST00000395146 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
AFF1-202ENST00000395146 CEP170Q5SW79 1584 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 SP4Q02446 784 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 CLIC6Q96NY7 704 aa11.86□□□□□ -0.51
AFF1-202ENST00000395146 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms