RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ADORA2AP29274 412 aa7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 ATP2B2Q01814 1243 aa7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 SHROOM1Q2M3G4 852 aaPredicted RBP7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 CTR9Q6PD62 1173 aa7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 KBTBD3Q8NAB2 608 aa7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 CHST13Q8NET6 341 aa7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 STRBPQ96SI9 672 aaKnown RBP7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 FBXO40Q9UH90 709 aa7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 MROH7Q68CQ1 1323 aa7.5□□□□□ -1.21
SMARCAD1-203ENST00000394961 ADAMTS4O75173 837 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 IFIT2P09913 472 aaKnown RBP7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 ZNF865P0CJ78 1059 aaPredicted RBP7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 ALX1Q15699 326 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 KIAA1755Q5JYT7 1200 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 APPBP2Q92624 585 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 GMCL1Q96IK5 515 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 ELP1O95163 1332 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 RALGAPA2Q2PPJ7 1873 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 PTPRSQ13332 1948 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 VWA5AO00534 786 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 COBLO75128 1261 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 ICA1Q05084 483 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 FEZ1Q99689 392 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 LRRCC1Q9C099 1032 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 PCP11498 1178 aaKnown RBP7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 FCER1AP12319 257 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 CDK7P50613 346 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 RTP1P59025 263 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 TMEM132BQ14DG7 1078 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 CLUAP1Q96AJ1 413 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 KATNBL1Q9H079 304 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 ECHDC1Q9NTX5 307 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 MCM9Q9NXL9 1143 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 FEM1BQ9UK73 627 aa7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 COL4A4P53420 1690 aaPredicted RBP7.49□□□□□ -1.21
SMARCAD1-203ENST00000394961 KBTBD13C9JR72 458 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 AKR1B1P15121 316 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 ERCC3P19447 782 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 MIGA1Q8NAN2 632 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 PDLIM7Q9NR12 457 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 TCP11L1Q9NUJ3 509 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 STAP2Q9UGK3 403 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 EXOC6BQ9Y2D4 811 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 SCN10AQ9Y5Y9 1956 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 RASA1P20936 1047 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 LRRC41Q15345 812 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 DDRGK1Q96HY6 314 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 KIAA0100Q14667 2235 aaKnown RBP7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 GSG1L2A8MUP6 293 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 AKR1A1P14550 325 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 GJA9P57773 515 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 BTNL9Q6UXG8 535 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 FAM160B2Q86V87 743 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 NEDD1Q8NHV4 660 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 UBE2OQ9C0C9 1292 aaKnown RBP7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 C1orf115Q9H7X2 142 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 SLC38A10Q9HBR0 1119 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 MCM3APO60318 1980 aa7.48□□□□□ -1.21
SMARCAD1-203ENST00000394961 RBM47A0AV96 593 aaKnown RBP7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 DUSP11O75319 330 aaKnown RBP7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 MBD4O95243 580 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 CCDC129Q6ZRS4 1044 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 GPATCH3Q96I76 525 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 MMP19Q99542 508 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 SLF1Q9BQI6 1058 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 TINF2Q9BSI4 451 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 GOLIM4O00461 696 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 RNF113AO15541 343 aaKnown RBP7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 CABYRO75952 493 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 RAB3GAP1Q15042 981 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 FGD4Q96M96 766 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 TEX13BQ9BXU2 312 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 SIP14410 1827 aa7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 PATL2C9JE40 543 aaKnown RBP7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 EEF2P13639 858 aaKnown RBP7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 PRPF38AQ8NAV1 312 aaKnown RBP7.47□□□□□ -1.21
SMARCAD1-203ENST00000394961 ORC4O43929 436 aa7.46□□□□□ -1.21
SMARCAD1-203ENST00000394961 HNRNPUQ00839 825 aaKnown RBP eCLIP7.46□□□□□ -1.21
SMARCAD1-203ENST00000394961 PANK1Q8TE04 598 aa7.46□□□□□ -1.21
SMARCAD1-203ENST00000394961 ATG4CQ96DT6 458 aa7.46□□□□□ -1.21
SMARCAD1-203ENST00000394961 PAGR1Q9BTK6 254 aa7.46□□□□□ -1.21
SMARCAD1-203ENST00000394961 ARMT1Q9H993 441 aa7.46□□□□□ -1.21
SMARCAD1-203ENST00000394961 GHRHRQ02643 423 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 ZMYM1Q5SVZ6 1142 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 CCDC174Q6PII3 467 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 RNF180Q86T96 592 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 RGS22Q8NE09 1264 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 GUCD1Q96NT3 240 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 RCAN3Q9UKA8 241 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 TBX21Q9UL17 535 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 CD4P01730 458 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 STAT3P40763 770 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 DPP9Q86TI2 863 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 TACC3Q9Y6A5 838 aa7.46□□□□□ -1.22
SMARCAD1-203ENST00000394961 POU3F3P20264 500 aaPredicted RBP7.45□□□□□ -1.22
SMARCAD1-203ENST00000394961 PTPN11Q06124 597 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms