RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 PCDHA4Q9UN74 947 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 GAKO14976 1311 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 ADAMTS3O15072 1205 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 PTPN14Q15678 1187 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 CEP135Q66GS9 1140 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 TMC4Q7Z404 712 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 SLF2Q8IX21 1173 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 LZTS2Q9BRK4 669 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 PYM1Q9BRP8 204 aaKnown RBP17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 NFE2L3Q9Y4A8 694 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 POLRMTO00411 1230 aaKnown RBP17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 NRDCO43847 1150 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 RHBDL3P58872 404 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 DDR1Q08345 913 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 DPYDQ12882 1025 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 SLC35G1Q2M3R5 365 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 E4F1Q66K89 784 aaPredicted RBP17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 C4orf32Q8N8J7 132 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 SLC44A5Q8NCS7 719 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 TMEM47Q9BQJ4 181 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 TMX1Q9H3N1 280 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 DDX60LQ5H9U9 1706 aaKnown RBP17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 FAM205AQ6ZU69 1335 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 CYTH3O43739 400 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 E2F4Q16254 413 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 ZNF827Q17R98 1081 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 INTS13Q9NVM9 706 aa17.45■□□□□ 0.38
UBE2D3-207ENST00000394801 CDK8P49336 464 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 IL17AQ16552 155 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 TEX11Q8IYF3 940 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 KIF2AO00139 706 aaPredicted RBP17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 NOVP48745 357 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 MFSD14BQ5SR56 506 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 ZNF710Q8N1W2 664 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 IQUBQ8NA54 791 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 CCDC112Q8NEF3 446 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 BARHL2Q9NY43 387 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 SAP30BPQ9UHR5 308 aaKnown RBP17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 EP400Q96L91 3159 aa17.44■□□□□ 0.38
UBE2D3-207ENST00000394801 FLT1P17948 1338 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 LRRC37AA6NMS7 1700 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 MCM7P33993 719 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 TBX2Q13207 712 aaPredicted RBP17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 SP8Q8IXZ3 490 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 CCDC148Q8NFR7 591 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 SNED1Q8TER0 1413 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 TSC1Q92574 1164 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 GPKOWQ92917 476 aaPredicted RBP eCLIP17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 CCDC94Q9BW85 323 aaPredicted RBP17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 TMEM232C9JQI7 657 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 TOP1P11387 765 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 LONP1P36776 959 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 AFMP43652 599 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 CUL4BQ13620 913 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 EYA3Q99504 573 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 SPZ1Q9BXG8 430 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 TRMT1Q9NXH9 659 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
UBE2D3-207ENST00000394801 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 SYCP1Q15431 976 aa17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 CDK11BP21127 795 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 PDXDC2PQ6P474 469 aa17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 PCDHA6Q9UN73 950 aa17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 PCDHA8Q9Y5H6 950 aa17.42■□□□□ 0.38
UBE2D3-207ENST00000394801 STXBP3O00186 592 aa17.41■□□□□ 0.38
UBE2D3-207ENST00000394801 TUBB4AP04350 444 aa17.41■□□□□ 0.38
UBE2D3-207ENST00000394801 SPATA1Q5VX52 437 aa17.41■□□□□ 0.38
UBE2D3-207ENST00000394801 TRMT44Q8IYL2 757 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-207ENST00000394801 SUGT1Q9Y2Z0 365 aa17.41■□□□□ 0.38
UBE2D3-207ENST00000394801 PPP1R3GB7ZBB8 358 aa17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 KLRF2D3W0D1 207 aa17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 CD44P16070 742 aaKnown RBP17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 NR1I3Q14994 352 aa17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 PPP1R13BQ96KQ4 1090 aa17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 SAMSN1Q9NSI8 373 aaKnown RBP17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 PROM2Q8N271 834 aa17.4■□□□□ 0.38
UBE2D3-207ENST00000394801 A0A1B0GTH6 734 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 CASP1P29466 404 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 SPECC1LQ69YQ0 1117 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 APTXQ7Z2E3 356 aaKnown RBP17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 ANKRD7Q92527 254 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 MTRQ99707 1265 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 COA1Q9GZY4 146 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 ZMYND12Q9H0C1 365 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.38
UBE2D3-207ENST00000394801 FOCADQ5VW36 1801 aa17.39■□□□□ 0.37
UBE2D3-207ENST00000394801 MYH1P12882 1939 aa17.39■□□□□ 0.37
UBE2D3-207ENST00000394801 CCP110O43303 1012 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms