RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ABCB5Q2M3G0 1257 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 BLIDQ8IZY5 108 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 VPS18Q9P253 973 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 MAGED2Q9UNF1 606 aaPredicted RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 LUC7L2Q9Y383 392 aaKnown RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 NRKQ7Z2Y5 1582 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 SYNJ2BP-COX16A0A087WUM0 186 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 RIOK3O14730 519 aaKnown RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 CLIC2O15247 247 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 DLATP10515 647 aaKnown RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 TRIM6Q9C030 488 aaPredicted RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 COX16Q9P0S2 106 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 ZEB2O60315 1214 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 OSTNP61366 133 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 PPP2R5CQ13362 524 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 HS2ST1Q7LGA3 356 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 HOOK3Q86VS8 718 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 PRPF38AQ8NAV1 312 aaKnown RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 UBLCP1Q8WVY7 318 aaPredicted RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 ZBED4O75132 1171 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 RRAGAQ7L523 313 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 TDRD3Q9H7E2 651 aaKnown RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 A0A1W2PRG0 241 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 CETN2P41208 172 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 RILPL1Q5EBL4 403 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 ZMYM1Q5SVZ6 1142 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 KLHL7Q8IXQ5 586 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 GLG1Q92896 1179 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 GJA10Q969M2 543 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 MPHOSPH6Q99547 160 aaKnown RBP10.17□□□□□ -0.78
CDH11-202ENST00000394156 CCPG1Q9ULG6 757 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 DNM3Q9UQ16 869 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 LAMC1P11047 1609 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 ABCA9Q8IUA7 1624 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 GAS7O60861 476 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 MRPS25P82663 173 aaKnown RBP10.17□□□□□ -0.78
CDH11-202ENST00000394156 LSM14BQ9BX40 385 aaKnown RBP10.17□□□□□ -0.78
CDH11-202ENST00000394156 FANCLQ9NW38 375 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 BABAM1Q9NWV8 329 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 ARPP21Q9UBL0 812 aaPredicted RBP10.17□□□□□ -0.78
CDH11-202ENST00000394156 ATP2B4P23634 1241 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 ERCC5P28715 1186 aaPredicted RBP10.17□□□□□ -0.78
CDH11-202ENST00000394156 TBC1D10CQ8IV04 446 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 CARD6Q9BX69 1037 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 NOD1Q9Y239 953 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 ABL1P00519 1130 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 MYSM1Q5VVJ2 828 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 CAPN12Q6ZSI9 719 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 NOSTRINQ8IVI9 506 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 CDK12Q9NYV4 1490 aaPredicted RBP10.17□□□□□ -0.78
CDH11-202ENST00000394156 EP400NLQ6ZTU2 488 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 PANK4Q9NVE7 773 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 PCDHB6Q9Y5E3 794 aa10.17□□□□□ -0.78
CDH11-202ENST00000394156 BICDL2A1A5D9 508 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 CUTAO60888 179 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 RASA3Q14644 834 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 C11orf57Q6ZUT1 292 aaPredicted RBP10.16□□□□□ -0.78
CDH11-202ENST00000394156 PCDHA12Q9UN75 941 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 KIDINS220Q9ULH0 1771 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 CTAGE15A4D2H0 777 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 HSF2BPO75031 334 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 CTAGE8P0CG41 777 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 SLFN13Q68D06 897 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
CDH11-202ENST00000394156 CTAGE6Q86UF2 777 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 CTAGE4Q8IX94 777 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 CCDC127Q96BQ5 260 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 CLASP1Q7Z460 1538 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 XDHP47989 1333 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 PABPC4Q13310 644 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDH11-202ENST00000394156 ELF2Q15723 593 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 CCDC63Q8NA47 563 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 AGTPBP1Q9UPW5 1226 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 AATKQ6ZMQ8 1374 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 BRD1O95696 1058 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 TNNI1P19237 187 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 HPDP32754 393 aaPredicted RBP10.16□□□□□ -0.78
CDH11-202ENST00000394156 ASIC2Q16515 512 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 TICAM2Q86XR7 235 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 IMPG2Q9BZV3 1241 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 KIAA1024Q9UPX6 916 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 GPSM2P81274 684 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 PPP1R21Q6ZMI0 780 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 MAP4K1Q92918 833 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 EPSTI1Q96J88 318 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 LLPHQ9BRT6 129 aaKnown RBP10.16□□□□□ -0.78
CDH11-202ENST00000394156 LRRC27Q9C0I9 530 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 AOX1Q06278 1338 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 SCG2P13521 617 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 HSPA1LP34931 641 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 PPP2R3AQ06190 1150 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 STRN3Q13033 797 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 PPP1R7Q15435 360 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 ANKRD35Q8N283 1001 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 ANKRD13CQ8N6S4 541 aa10.16□□□□□ -0.78
CDH11-202ENST00000394156 TMEM260Q9NX78 707 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms