RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 SPECC1Q5M775 1068 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 FAM182BQ5T319 152 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 RCSD1Q6JBY9 416 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 CDAN1Q8IWY9 1227 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SPATA20Q8TB22 786 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 ENOX1Q8TC92 643 aaKnown RBP8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SH3RF3Q8TEJ3 882 aaPredicted RBP8.19□□□□□ -1.1
SMAD1-202ENST00000394092 CRAMP1Q96RY5 1269 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 RTFDC1Q9BY42 306 aaPredicted RBP8.19□□□□□ -1.1
SMAD1-202ENST00000394092 CD209Q9NNX6 404 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 NRXN2Q9P2S2 1712 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 ANKRD31Q8N7Z5 1873 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 GPR75-ASB3A0A0A6YYF3 556 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 NMT2O60551 498 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 TOP1P11387 765 aaKnown RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 HOXA10P31260 410 aaPredicted RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 BTDP43251 543 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 GPSM2P81274 684 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 GRIN1Q05586 938 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 NPY5RQ15761 445 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 GLIPR1L2Q4G1C9 344 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 CEP135Q66GS9 1140 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 ISM2Q6H9L7 571 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 PIK3AP1Q6ZUJ8 805 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 VSTM4Q8IW00 320 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 TEX11Q8IYF3 940 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 BLIDQ8IZY5 108 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 PDILTQ8N807 584 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 IQUBQ8NA54 791 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 SYMPKQ92797 1274 aaKnown RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 DHX58Q96C10 678 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 GSDMAQ96QA5 445 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 PCDHA4Q9UN74 947 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 JAG2Q9Y219 1238 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 SUGT1Q9Y2Z0 365 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 C10orf71Q711Q0 1435 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 CCDC194A0A1B0GVG4 234 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 hCG_1642624A0A1W2PR95 340 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 hCG_1984214I3L0E3 225 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 LAD1O00515 517 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 ATP1A3P13637 1013 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 CDK11BP21127 795 aaKnown RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 LONP1P36776 959 aaKnown RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 PTGDRQ13258 359 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 DIXDC1Q155Q3 683 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 NYAP1Q6ZVC0 841 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 FCHSD1Q86WN1 690 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 FOXP4Q8IVH2 680 aaPredicted RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 CCAR2Q8N163 923 aaKnown RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 ZNF713Q8N859 430 aaPredicted RBP8.18□□□□□ -1.1
SMAD1-202ENST00000394092 TGFBRAP1Q8WUH2 860 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 SHISA4Q96DD7 197 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 HSD3B7Q9H2F3 369 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 FANCLQ9NW38 375 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 RMND1Q9NWS8 449 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 NFE2L3Q9Y4A8 694 aa8.18□□□□□ -1.1
SMAD1-202ENST00000394092 GAKO14976 1311 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 SYNRGQ9UMZ2 1314 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 PLIN4Q96Q06 1357 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 SNED1Q8TER0 1413 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 FAM205CA6NFA0 338 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 FOXN1O15353 648 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 CTIFO43310 598 aaKnown RBP8.17□□□□□ -1.1
SMAD1-202ENST00000394092 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 SEMA3FQ13275 785 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 ARID5BQ14865 1188 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 ZNF174Q15697 407 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 EARS2Q5JPH6 523 aaKnown RBP8.17□□□□□ -1.1
SMAD1-202ENST00000394092 MFSD14BQ5SR56 506 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 ARMCX5Q6P1M9 558 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 MAPKAPK5Q8IW41 473 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 NEDD1Q8NHV4 660 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 KIF18AQ8NI77 898 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 CTAGE1Q96RT6 745 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 SPZ1Q9BXG8 430 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 LRRC4BQ9NT99 713 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 MAD2L2Q9UI95 211 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 STX8Q9UNK0 236 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 FLT1P17948 1338 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 FAM205AQ6ZU69 1335 aa8.17□□□□□ -1.1
SMAD1-202ENST00000394092 KLRG2A4D1S0 409 aaPredicted RBP8.16□□□□□ -1.1
SMAD1-202ENST00000394092 GOLGA6L9A6NEM1 432 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 PPEF1O14829 653 aaPredicted RBP8.16□□□□□ -1.1
SMAD1-202ENST00000394092 MYL1P05976 194 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 ZNF18P17022 549 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 RASA1P20936 1047 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 RBM10P98175 930 aaKnown RBP8.16□□□□□ -1.1
SMAD1-202ENST00000394092 DPYDQ12882 1025 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 ORC2Q13416 577 aaPredicted RBP8.16□□□□□ -1.1
SMAD1-202ENST00000394092 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 SPATA1Q5VX52 437 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 TBC1D16Q8TBP0 767 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 DYNLL2Q96FJ2 89 aa8.16□□□□□ -1.1
SMAD1-202ENST00000394092 PAGE5Q96GU1 130 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms