RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 VEGFAP15692 232 aaPredicted RBP9.95□□□□□ -0.82
TDP1-203ENST00000393454 ATP2B1P20020 1258 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 ICA1Q05084 483 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 CCDC183Q5T5S1 534 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 HEATR3Q7Z4Q2 680 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 METTL16Q86W50 562 aaKnown RBP9.95□□□□□ -0.82
TDP1-203ENST00000393454 SHISA4Q96DD7 197 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 RRP36Q96EU6 259 aaKnown RBP9.95□□□□□ -0.82
TDP1-203ENST00000393454 SYT17Q9BSW7 474 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 UBA5Q9GZZ9 404 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
TDP1-203ENST00000393454 SEC63Q9UGP8 760 aaKnown RBP9.95□□□□□ -0.82
TDP1-203ENST00000393454 GREB1LQ9C091 1923 aaPredicted RBP9.94□□□□□ -0.82
TDP1-203ENST00000393454 SPTLC2O15270 562 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 YEATS4O95619 227 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 LIG1P18858 919 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 SLC35G1Q2M3R5 365 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 ASPRV1Q53RT3 343 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 LINC00301Q8NCQ3 95 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 KCNG4Q8TDN1 519 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 SPZ1Q9BXG8 430 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 NYAP2Q9P242 653 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 CALML3P27482 149 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 NASPP49321 788 aaPredicted RBP9.94□□□□□ -0.82
TDP1-203ENST00000393454 TNFAIP1Q13829 316 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 RASA3Q14644 834 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 RRP1BQ14684 758 aaKnown RBP9.94□□□□□ -0.82
TDP1-203ENST00000393454 KIF4BQ2VIQ3 1234 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 KCTD1Q719H9 257 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 CCAR1Q8IX12 1150 aaKnown RBP9.94□□□□□ -0.82
TDP1-203ENST00000393454 SH3GLB2Q9NR46 395 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 PCDHA7Q9UN72 937 aa9.94□□□□□ -0.82
TDP1-203ENST00000393454 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 SMARCA1P28370 1054 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 MARCKSP29966 332 aaPredicted RBP9.93□□□□□ -0.82
TDP1-203ENST00000393454 ZNF445P59923 1031 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 JAG1P78504 1218 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 ZNF543Q08ER8 600 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 SLC39A14Q15043 492 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 RILPL1Q5EBL4 403 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 SLFN13Q68D06 897 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 WWC2Q6AWC2 1192 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 CCDC148Q8NFR7 591 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 MKL1Q969V6 931 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 PIGSQ96S52 555 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 HACL1Q9UJ83 578 aa9.93□□□□□ -0.82
TDP1-203ENST00000393454 ASTN2O75129 1339 aaPredicted RBP9.93□□□□□ -0.82
TDP1-203ENST00000393454 SLC1A4P43007 532 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 L1TD1Q5T7N2 865 aaKnown RBP9.92□□□□□ -0.82
TDP1-203ENST00000393454 TTBK2Q6IQ55 1244 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 CCDC73Q6ZRK6 1079 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 GAS2L3Q86XJ1 694 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 JMYQ8N9B5 988 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 FSIP1Q8NA03 581 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 RIOX1Q9H6W3 641 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 BARHL2Q9NY43 387 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 DACT1Q9NYF0 836 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 NOL7Q9UMY1 257 aaKnown RBP9.92□□□□□ -0.82
TDP1-203ENST00000393454 DICER1Q9UPY3 1922 aaKnown RBP9.92□□□□□ -0.82
TDP1-203ENST00000393454 FAM205CA6NFA0 338 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 STXBP3O00186 592 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 TBC1D12O60347 775 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 LETM1O95202 739 aaPredicted RBP9.92□□□□□ -0.82
TDP1-203ENST00000393454 SLC16A2P36021 539 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 TOB1P50616 345 aaPredicted RBP9.92□□□□□ -0.82
TDP1-203ENST00000393454 NAPAP54920 295 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 GPATCH4Q5T3I0 446 aaKnown RBP9.92□□□□□ -0.82
TDP1-203ENST00000393454 ADALQ6DHV7 355 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 SIAH1Q8IUQ4 282 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 BLIDQ8IZY5 108 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 GPC2Q8N158 579 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 CCDC12Q8WUD4 166 aaPredicted RBP9.92□□□□□ -0.82
TDP1-203ENST00000393454 DCAF4Q8WV16 495 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 RNF181Q9P0P0 153 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 PCDHA4Q9UN74 947 aa9.92□□□□□ -0.82
TDP1-203ENST00000393454 F5H6K3 240 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 NR1I2O75469 434 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 KLRC3Q07444 240 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 NPY5RQ15761 445 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 CAMK4Q16566 473 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 EARS2Q5JPH6 523 aaKnown RBP9.91□□□□□ -0.82
TDP1-203ENST00000393454 LRSAM1Q6UWE0 723 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 PIK3AP1Q6ZUJ8 805 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 ADGRF4Q8IZF3 695 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 NUP62CLQ9H1M0 184 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 DDX19AQ9NUU7 478 aaKnown RBP9.91□□□□□ -0.82
TDP1-203ENST00000393454 GPRC5DQ9NZD1 345 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 ZBTB21Q9ULJ3 1066 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 CEP131Q9UPN4 1083 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 PCDHB6Q9Y5E3 794 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 SBF1O95248 1867 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 FSD2A1L4K1 749 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 TRIM75PA6NK02 468 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 YBX3P16989 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
TDP1-203ENST00000393454 IKQ13123 557 aaPredicted RBP9.91□□□□□ -0.82
TDP1-203ENST00000393454 PTPAQ15257 358 aa9.91□□□□□ -0.82
TDP1-203ENST00000393454 NOM1Q5C9Z4 860 aaKnown RBP9.91□□□□□ -0.82
TDP1-203ENST00000393454 ANGEL2Q5VTE6 544 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms