RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 AKNAD1Q5T1N1 836 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 WDR78Q5VTH9 848 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 PIP4P2Q8N4L2 257 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 STAG1Q8WVM7 1258 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 ARMC5Q96C12 935 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 ZNF333Q96JL9 665 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 DSCC1Q9BVC3 393 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 ISY1Q9ULR0 285 aaKnown RBP9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 RABGAP1Q9Y3P9 1069 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 TAF6LQ9Y6J9 622 aa9.08□□□□□ -0.96
HMGB3P1-201ENST00000393368 RAD50Q92878 1312 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 B4E1Z4 1266 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 SGSM2O43147 1006 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 ADCY3O60266 1144 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 CYP2B6P20813 491 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 HOXD10P28358 340 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 GRK4P32298 578 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 TRIM32Q13049 653 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 PLS1Q14651 629 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 IMMTQ16891 758 aaKnown RBP9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 SLFN13Q68D06 897 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 LBX2Q6XYB7 198 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 MFSD6Q6ZSS7 791 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 GPR142Q7Z601 462 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 CCAR1Q8IX12 1150 aaKnown RBP9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 MKL1Q969V6 931 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 COA7Q96BR5 231 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 MOV10L1Q9BXT6 1211 aaKnown RBP9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 CWC22Q9HCG8 908 aaKnown RBP9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 GJD2Q9UKL4 321 aa9.07□□□□□ -0.96
HMGB3P1-201ENST00000393368 A0A0G2JMZ2 1700 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 KDM4AO75164 1064 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 INHAP05111 366 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 TAL1P17542 331 aaPredicted RBP9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 MCCP23508 829 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 FXR2P51116 673 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 PRMT2P55345 433 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 SNAP25P60880 206 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 TMEM132BQ14DG7 1078 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 CCL14Q16627 93 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 KCTD1Q719H9 257 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 PLEKHH3Q7Z736 793 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 GMCL1P1Q8NEA9 526 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 GTF3C2Q8WUA4 911 aaPredicted RBP9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 RUFY2Q8WXA3 655 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 SLF1Q9BQI6 1058 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 TMEM47Q9BQJ4 181 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 SPATC1LQ9H0A9 340 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 HOXC10Q9NYD6 342 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 BIN2Q9UBW5 565 aaPredicted RBP9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 PPP1R9AQ9ULJ8 1098 aa9.06□□□□□ -0.96
HMGB3P1-201ENST00000393368 LAMA4Q16363 1823 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 MGAMO43451 1857 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 TMEM232C9JQI7 657 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 VWA5AO00534 786 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 CYP21A2P08686 494 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 BMP3P12645 472 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 ERCC3P19447 782 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 EN2P19622 333 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 MAPK4P31152 587 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 CCDC96Q2M329 555 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 BMP2KLQ5H9B9 411 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 MORN1Q5T089 497 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 RCSD1Q6JBY9 416 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 NCAPG2Q86XI2 1143 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 REPS2Q8NFH8 660 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 TRIB2Q92519 343 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 ESR2Q92731 530 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 UNC93B1Q9H1C4 597 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 RNF41Q9H4P4 317 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 CTNNA3Q9UI47 895 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 RLFQ13129 1914 aa9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P1-201ENST00000393368 PLXNB2O15031 1838 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 SPDYE4A6NLX3 237 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 CCL5P13501 91 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 PTPREP23469 700 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 SLC1A4P43007 532 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 NOVP48745 357 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 CCNA1P78396 465 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 IKQ13123 557 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 IRF5Q13568 498 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 TTBK2Q6IQ55 1244 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 STOX1Q6ZVD7 989 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 CYB5R4Q7L1T6 521 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 CPXCR1Q8N123 301 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 SOCS4Q8WXH5 440 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 USP6NLQ92738 828 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 LSG1Q9H089 658 aaKnown RBP9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 RAVER2Q9HCJ3 691 aaKnown RBP9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 PPP4R2Q9NY27 417 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 FLRT1Q9NZU1 646 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms