RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 ZNF280CQ8ND82 737 aa9.78□□□□□ -0.84
CASP4-201ENST00000393150 GTF3C2Q8WUA4 911 aaPredicted RBP9.78□□□□□ -0.84
CASP4-201ENST00000393150 TSR2Q969E8 191 aaKnown RBP9.78□□□□□ -0.84
CASP4-201ENST00000393150 SRCIN1Q9C0H9 1055 aa9.78□□□□□ -0.84
CASP4-201ENST00000393150 DAGLAQ9Y4D2 1042 aa9.78□□□□□ -0.84
CASP4-201ENST00000393150 MGAMO43451 1857 aa9.78□□□□□ -0.84
CASP4-201ENST00000393150 CNGA1P29973 690 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 PLA2G5P39877 138 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 SPP2Q13103 211 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 LRRC26Q2I0M4 334 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 BEND3Q5T5X7 828 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 SPTY2D1Q68D10 685 aaPredicted RBP9.77□□□□□ -0.85
CASP4-201ENST00000393150 DZIP1Q86YF9 867 aaKnown RBP9.77□□□□□ -0.85
CASP4-201ENST00000393150 ARRDC4Q8NCT1 418 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 MYLIPQ8WY64 445 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 LPIN2Q92539 896 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.77□□□□□ -0.85
CASP4-201ENST00000393150 GJD2Q9UKL4 321 aa9.77□□□□□ -0.85
CASP4-201ENST00000393150 VCANP13611 3396 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 PFASO15067 1338 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 USP17L5A8MUK1 530 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 PHF20L1A8MW92 1017 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 VARSP26640 1264 aaKnown RBP9.76□□□□□ -0.85
CASP4-201ENST00000393150 RGS3P49796 1198 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 CCNA1P78396 465 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 NFIAQ12857 509 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 TRIB2Q92519 343 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 ZNF592Q92610 1267 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 PBXIP1Q96AQ6 731 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 IDI2Q9BXS1 227 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 PUS3Q9BZE2 481 aaKnown RBP9.76□□□□□ -0.85
CASP4-201ENST00000393150 OSBPL5Q9H0X9 879 aaPredicted RBP9.76□□□□□ -0.85
CASP4-201ENST00000393150 ASCC2Q9H1I8 757 aaPredicted RBP9.76□□□□□ -0.85
CASP4-201ENST00000393150 PRDM5Q9NQX1 630 aaPredicted RBP9.76□□□□□ -0.85
CASP4-201ENST00000393150 DENND2AQ9ULE3 1009 aa9.76□□□□□ -0.85
CASP4-201ENST00000393150 ESPNB1AK53 854 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 KBTBD13C9JR72 458 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 F6X3S4 739 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 CD2BP2O95400 341 aaKnown RBP9.75□□□□□ -0.85
CASP4-201ENST00000393150 COL6A1P12109 1028 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 SKIP12755 728 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 HMGCS2P54868 508 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 ATP2B2Q01814 1243 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 CACNB2Q08289 660 aaPredicted RBP9.75□□□□□ -0.85
CASP4-201ENST00000393150 PICALMQ13492 652 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 EPHA10Q5JZY3 1008 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 TREML2Q5T2D2 321 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 MAP3K21Q5TCX8 1036 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 PLEKHH3Q7Z736 793 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 ATXN2LQ8WWM7 1075 aaKnown RBP9.75□□□□□ -0.85
CASP4-201ENST00000393150 GAS2L1Q99501 681 aaPredicted RBP9.75□□□□□ -0.85
CASP4-201ENST00000393150 MORF4L1Q9UBU8 362 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 ATP11BQ9Y2G3 1177 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 IVNS1ABPQ9Y6Y0 642 aa9.75□□□□□ -0.85
CASP4-201ENST00000393150 DNM1LO00429 736 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 SIAH2O43255 324 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 RGS20O76081 388 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 SLC19A1P41440 591 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 SLFNL1Q499Z3 407 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 WDR78Q5VTH9 848 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 CCDC174Q6PII3 467 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 RNF135Q8IUD6 432 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 APBA2Q99767 749 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 NOL10Q9BSC4 688 aaKnown RBP9.74□□□□□ -0.85
CASP4-201ENST00000393150 C1QTNF1Q9BXJ1 281 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 HCN4Q9Y3Q4 1203 aa9.74□□□□□ -0.85
CASP4-201ENST00000393150 IL16Q14005 1332 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 C19orf81C9J6K1 198 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 MAP4K4O95819 1239 aaPredicted RBP9.73□□□□□ -0.85
CASP4-201ENST00000393150 LDHCP07864 332 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 RTP1P59025 263 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 GSTO1P78417 241 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 MAP3K10Q02779 954 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 SHHQ15465 462 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 CCDC27Q2M243 656 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 LRRC24Q50LG9 513 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 PLPP7Q8NBV4 271 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 LPAR1Q92633 364 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 EDC3Q96F86 508 aaKnown RBP9.73□□□□□ -0.85
CASP4-201ENST00000393150 RNPC3Q96LT9 517 aaKnown RBP9.73□□□□□ -0.85
CASP4-201ENST00000393150 ABCF2Q9UG63 623 aa9.73□□□□□ -0.85
CASP4-201ENST00000393150 DDX20Q9UHI6 824 aaKnown RBP9.73□□□□□ -0.85
CASP4-201ENST00000393150 DOCK3Q8IZD9 2030 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 ASNSP08243 561 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 PRDX5P30044 214 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 CCND3P30281 292 aaPredicted RBP9.72□□□□□ -0.85
CASP4-201ENST00000393150 MRPS5P82675 430 aaKnown RBP9.72□□□□□ -0.85
CASP4-201ENST00000393150 MAP3K12Q12852 859 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 USP17L2Q6R6M4 530 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 ZFPM1Q8IX07 1006 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 PAGR1Q9BTK6 254 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 SLC5A4Q9NY91 659 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 HDAC5Q9UQL6 1122 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 MAP4K5Q9Y4K4 846 aa9.72□□□□□ -0.85
CASP4-201ENST00000393150 DDX60LQ5H9U9 1706 aaKnown RBP9.72□□□□□ -0.85
CASP4-201ENST00000393150 SALL1Q9NSC2 1324 aa9.71□□□□□ -0.85
CASP4-201ENST00000393150 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms