RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PIGSQ96S52 555 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 OFD1O75665 1012 aa17.21■□□□□ 0.35
MKS1-202ENST00000393119 PARP1P09874 1014 aaKnown RBP17.21■□□□□ 0.35
MKS1-202ENST00000393119 SEPT2Q15019 361 aa17.21■□□□□ 0.35
MKS1-202ENST00000393119 PIK3AP1Q6ZUJ8 805 aa17.21■□□□□ 0.35
MKS1-202ENST00000393119 SIAH1Q8IUQ4 282 aa17.21■□□□□ 0.35
MKS1-202ENST00000393119 FMR1NBQ8N0W7 255 aaPredicted RBP17.21■□□□□ 0.35
MKS1-202ENST00000393119 TNFRSF25Q93038 417 aa17.21■□□□□ 0.35
MKS1-202ENST00000393119 PI4KBQ9UBF8 816 aa17.21■□□□□ 0.35
MKS1-202ENST00000393119 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.35
MKS1-202ENST00000393119 NOVP48745 357 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 DLGAP5Q15398 846 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 ZNF174Q15697 407 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 MAP3K11Q16584 847 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 USP49Q70CQ1 688 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 MIGA2Q7L4E1 593 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 KCNG4Q8TDN1 519 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.34
MKS1-202ENST00000393119 CSRNP1Q96S65 589 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 TMEM39BQ9GZU3 492 aa17.21■□□□□ 0.34
MKS1-202ENST00000393119 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.34
MKS1-202ENST00000393119 PFKFB1P16118 471 aa17.2■□□□□ 0.34
MKS1-202ENST00000393119 CERKLQ49MI3 558 aaPredicted RBP17.2■□□□□ 0.34
MKS1-202ENST00000393119 ZSCAN30Q86W11 494 aa17.2■□□□□ 0.34
MKS1-202ENST00000393119 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
MKS1-202ENST00000393119 SIPA1L1O43166 1804 aa17.19■□□□□ 0.34
MKS1-202ENST00000393119 TTLL1O95922 423 aa17.19■□□□□ 0.34
MKS1-202ENST00000393119 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
MKS1-202ENST00000393119 FAM160A1Q05DH4 1040 aa17.19■□□□□ 0.34
MKS1-202ENST00000393119 OGFOD1Q8N543 542 aa17.19■□□□□ 0.34
MKS1-202ENST00000393119 NUP88Q99567 741 aaPredicted RBP17.19■□□□□ 0.34
MKS1-202ENST00000393119 DDX19AQ9NUU7 478 aaKnown RBP17.19■□□□□ 0.34
MKS1-202ENST00000393119 SWAP70Q9UH65 585 aa17.19■□□□□ 0.34
MKS1-202ENST00000393119 SNAP25P60880 206 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 TYRO3Q06418 890 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 CCDC178Q5BJE1 867 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 CCDC84Q86UT8 332 aaPredicted RBP17.18■□□□□ 0.34
MKS1-202ENST00000393119 MYH6P13533 1939 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 STXBP3O00186 592 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
MKS1-202ENST00000393119 XBP1P17861 261 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 COA7Q96BR5 231 aa17.18■□□□□ 0.34
MKS1-202ENST00000393119 AP5Z1O43299 807 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 GH2P01242 217 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 ISM2Q6H9L7 571 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 SAMD7Q7Z3H4 446 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 EHD4Q9H223 541 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 DHX36Q9H2U1 1008 aaKnown RBP17.17■□□□□ 0.34
MKS1-202ENST00000393119 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 WNT10BO00744 389 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 ZNF202O95125 648 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 TRIM34Q9BYJ4 488 aa17.17■□□□□ 0.34
MKS1-202ENST00000393119 FBXO2Q9UK22 296 aaPredicted RBP17.17■□□□□ 0.34
MKS1-202ENST00000393119 PLIN4Q96Q06 1357 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 A0A1W2PQ27 194 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 A0A1W2PQ64 194 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 A0A1W2PQD8 194 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 FOXN1O15353 648 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 ANO6Q4KMQ2 910 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 RILPL1Q5EBL4 403 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 TATDN1Q6P1N9 297 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 DNAJC25Q9H1X3 360 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 KINO60870 393 aaKnown RBP17.16■□□□□ 0.34
MKS1-202ENST00000393119 LETM1O95202 739 aaPredicted RBP17.16■□□□□ 0.34
MKS1-202ENST00000393119 CCDC96Q2M329 555 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 HS1BP3Q53T59 392 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 LUZP1Q86V48 1076 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 BLIDQ8IZY5 108 aa17.16■□□□□ 0.34
MKS1-202ENST00000393119 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 USP17L10C9JJH3 530 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
MKS1-202ENST00000393119 PPP6R2O75170 966 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 CMA1P23946 247 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 MCM7P33993 719 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 GNAQP50148 359 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 RBM43Q6ZSC3 357 aaKnown RBP17.15■□□□□ 0.34
MKS1-202ENST00000393119 SPICE1Q8N0Z3 855 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 CSRNP2Q9H175 543 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 BARHL2Q9NY43 387 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 USP25Q9UHP3 1055 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 HDAC9Q9UKV0 1011 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 PCDHA6Q9UN73 950 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 PCDHA8Q9Y5H6 950 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 BIN1O00499 593 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 ECE1P42892 770 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 ABCB5Q2M3G0 1257 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 ADGRF4Q8IZF3 695 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 PDILTQ8N807 584 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 RGS22Q8NE09 1264 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
MKS1-202ENST00000393119 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms