RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 USP17L15C9J2P7 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L13C9JLJ4 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L11C9JVI0 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L18D6R9N7 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L22D6RA61 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L17D6RBQ6 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L19D6RCP7 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L20D6RJB6 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 USP17L24Q0WX57 530 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 CAPNS2Q96L46 248 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.08
USP44-202ENST00000393091 OAZ1P54368 228 aa15.52■□□□□ 0.07
USP44-202ENST00000393091 FUT2Q10981 343 aa15.52■□□□□ 0.07
USP44-202ENST00000393091 PRKG1Q13976 671 aa15.52■□□□□ 0.07
USP44-202ENST00000393091 CATIPQ7Z7H3 387 aa15.52■□□□□ 0.07
USP44-202ENST00000393091 RIOX1Q9H6W3 641 aa15.52■□□□□ 0.07
USP44-202ENST00000393091 SENP2Q9HC62 589 aa15.52■□□□□ 0.07
USP44-202ENST00000393091 FAM217BQ9NTX9 383 aaPredicted RBP15.52■□□□□ 0.07
USP44-202ENST00000393091 TMOD4Q9NZQ9 345 aa15.52■□□□□ 0.07
USP44-202ENST00000393091 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.52■□□□□ 0.07
USP44-202ENST00000393091 ALDH1A1P00352 501 aa15.51■□□□□ 0.07
USP44-202ENST00000393091 GNAQP50148 359 aa15.51■□□□□ 0.07
USP44-202ENST00000393091 AK2P54819 239 aa15.51■□□□□ 0.07
USP44-202ENST00000393091 SH2B1Q9NRF2 756 aaPredicted RBP15.51■□□□□ 0.07
USP44-202ENST00000393091 ABT1Q9ULW3 272 aaKnown RBP15.51■□□□□ 0.07
USP44-202ENST00000393091 PDIA3P30101 505 aaKnown RBP15.51■□□□□ 0.07
USP44-202ENST00000393091 SLFN13Q68D06 897 aa15.51■□□□□ 0.07
USP44-202ENST00000393091 IFNL1Q8IU54 200 aa15.51■□□□□ 0.07
USP44-202ENST00000393091 JMYQ8N9B5 988 aa15.51■□□□□ 0.07
USP44-202ENST00000393091 REPS2Q8NFH8 660 aa15.51■□□□□ 0.07
USP44-202ENST00000393091 PTPN18Q99952 460 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 TOMM22Q9NS69 142 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 LCTP09848 1927 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 BMP3P12645 472 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 GHRHRQ02643 423 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 MB21D1Q8N884 522 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 MORF4L1Q9UBU8 362 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 LRRC37A2A6NM11 1700 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 STK36Q9NRP7 1315 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 CASP8AP2Q9UKL3 1982 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 CCDC69A6NI79 296 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 ST18O60284 1047 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 DSG3P32926 999 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 CLEC10AQ8IUN9 316 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 ZKSCAN3Q9BRR0 538 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 RANBP17Q9H2T7 1088 aaKnown RBP15.5■□□□□ 0.07
USP44-202ENST00000393091 LIMCH1Q9UPQ0 1083 aa15.5■□□□□ 0.07
USP44-202ENST00000393091 KIF5BP33176 963 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 NTRK3Q16288 839 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 FANCBQ8NB91 859 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 PNMA3Q9UL41 463 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 VEGFBP49765 207 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 NEK4P51957 841 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 CUL4AQ13619 759 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 STK11IPQ8N1F8 1099 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 LLPHQ9BRT6 129 aaKnown RBP15.49■□□□□ 0.07
USP44-202ENST00000393091 PPP1R9AQ9ULJ8 1098 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 STX8Q9UNK0 236 aa15.49■□□□□ 0.07
USP44-202ENST00000393091 CCL15-CCL14A0A0B4J2E2 113 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 CCDC196A0A1B0GTZ2 297 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 BTBD19C9JJ37 291 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 CPA1P15085 419 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 HMGCS2P54868 508 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 CCL15Q16663 113 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 TMTC3Q6ZXV5 915 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 NBPF11Q86T75 865 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 SAMD3Q8N6K7 520 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 TPCN1Q9ULQ1 816 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 TRIM75PA6NK02 468 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 hCG_1984214I3L0E3 225 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 ZBTB43O43298 467 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 TREML2Q5T2D2 321 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 CHST3Q7LGC8 479 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 ZNF713Q8N859 430 aaPredicted RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 BRF1Q92994 677 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 HOXC10Q9NYD6 342 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 PARP1P09874 1014 aaKnown RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 OSBPP22059 807 aa15.48■□□□□ 0.07
USP44-202ENST00000393091 KIF23Q02241 960 aaPredicted RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 UPF3BQ9BZI7 483 aaKnown RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 RPAP3Q9H6T3 665 aaPredicted RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 RBM27Q9P2N5 1060 aaKnown RBP15.48■□□□□ 0.07
USP44-202ENST00000393091 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
USP44-202ENST00000393091 CYP4F22Q6NT55 531 aa15.47■□□□□ 0.07
USP44-202ENST00000393091 GTF3C6Q969F1 213 aa15.47■□□□□ 0.07
USP44-202ENST00000393091 KLF18A0A0U1RQI7 1052 aa15.47■□□□□ 0.07
USP44-202ENST00000393091 COPB2P35606 906 aa15.47■□□□□ 0.07
USP44-202ENST00000393091 COG2Q14746 738 aa15.47■□□□□ 0.07
USP44-202ENST00000393091 OTUD7BQ6GQQ9 843 aa15.47■□□□□ 0.07
USP44-202ENST00000393091 CCDC84Q86UT8 332 aaPredicted RBP15.47■□□□□ 0.07
USP44-202ENST00000393091 PRPF38AQ8NAV1 312 aaKnown RBP15.47■□□□□ 0.07
USP44-202ENST00000393091 IGF2BP3O00425 579 aaKnown RBP eCLIP15.46■□□□□ 0.07
USP44-202ENST00000393091 IFNAR1P17181 557 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 APOBRQ0VD83 1088 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 SLC35G1Q2M3R5 365 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 POTEEQ6S8J3 1075 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms