RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 HMGCS2P54868 508 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 DGKZQ13574 1117 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 APOA5Q6Q788 366 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 FASTKD5Q7L8L6 764 aaKnown RBP15.82■□□□□ 0.12
PTN-202ENST00000393083 ANKRD23Q86SG2 305 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 GBP4Q96PP9 640 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 CFHR5Q9BXR6 569 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 KIAA1683Q9H0B3 1180 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 KANSL2Q9H9L4 492 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 ZCCHC17Q9NP64 241 aaKnown RBP15.82■□□□□ 0.12
PTN-202ENST00000393083 HPS5Q9UPZ3 1129 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 GREB1LQ9C091 1923 aaPredicted RBP15.82■□□□□ 0.12
PTN-202ENST00000393083 PLIN4Q96Q06 1357 aa15.82■□□□□ 0.12
PTN-202ENST00000393083 TFAP4Q01664 338 aa15.81■□□□□ 0.12
PTN-202ENST00000393083 FAM47AQ5JRC9 791 aa15.81■□□□□ 0.12
PTN-202ENST00000393083 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
PTN-202ENST00000393083 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
PTN-202ENST00000393083 IQCA1Q86XH1 822 aa15.81■□□□□ 0.12
PTN-202ENST00000393083 PROCA1Q8NCQ7 364 aaPredicted RBP15.81■□□□□ 0.12
PTN-202ENST00000393083 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
PTN-202ENST00000393083 NEDD1Q8NHV4 660 aa15.81■□□□□ 0.12
PTN-202ENST00000393083 SMARCC2Q8TAQ2 1214 aa15.81■□□□□ 0.12
PTN-202ENST00000393083 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
PTN-202ENST00000393083 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
PTN-202ENST00000393083 PTPDC1A2A3K4 754 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 TSPY2A6NKD2 308 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 ZBTB43O43298 467 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 STX6O43752 255 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 SYT1P21579 422 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 NT5C2P49902 561 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 METAP2P50579 478 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTN-202ENST00000393083 ICA1Q05084 483 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 SEC23AQ15436 765 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 TREML2Q5T2D2 321 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 GADL1Q6ZQY3 521 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 MICU3Q86XE3 530 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 ZSCAN10Q96SZ4 725 aaPredicted RBP15.8■□□□□ 0.12
PTN-202ENST00000393083 R3HDMLQ9H3Y0 253 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 TSKSQ9UJT2 592 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 SLC12A7Q9Y666 1083 aa15.8■□□□□ 0.12
PTN-202ENST00000393083 GOLGA8AA7E2F4 631 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 PDHXO00330 501 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 DHX16O60231 1041 aaKnown RBP15.79■□□□□ 0.12
PTN-202ENST00000393083 CTDNEP1O95476 244 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 TBC1D8O95759 1140 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 TSPY3P0CV98 308 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 TSPY8P0CW00 308 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 HSPA8P11142 646 aaKnown RBP15.79■□□□□ 0.12
PTN-202ENST00000393083 EEF2P13639 858 aaKnown RBP15.79■□□□□ 0.12
PTN-202ENST00000393083 HMGN5P82970 282 aaKnown RBP15.79■□□□□ 0.12
PTN-202ENST00000393083 USP17L2Q6R6M4 530 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 SYNE3Q6ZMZ3 975 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 ENAHQ8N8S7 591 aaPredicted RBP15.79■□□□□ 0.12
PTN-202ENST00000393083 DDX11Q96FC9 970 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 C12orf42Q96LP6 360 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 ANP32EQ9BTT0 268 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 AGTPBP1Q9UPW5 1226 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 SLC45A1Q9Y2W3 748 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 TMX2Q9Y320 296 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 NID2Q14112 1375 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 LOC285556D6RIA3 1793 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 RXRAP19793 462 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 PDCP20941 246 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 MCM4P33991 863 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 CTCFP49711 727 aaPredicted RBP15.79■□□□□ 0.12
PTN-202ENST00000393083 CRHR2Q13324 411 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 IFIT1BQ5T764 474 aaKnown RBP15.79■□□□□ 0.12
PTN-202ENST00000393083 TMTC2Q8N394 836 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 FAM184AQ8NB25 1140 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 CEP95Q96GE4 821 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 FEZ1Q99689 392 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 MYL10Q9BUA6 226 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 IL17RBQ9NRM6 502 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 MTMR4Q9NYA4 1195 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 NYAP2Q9P242 653 aa15.79■□□□□ 0.12
PTN-202ENST00000393083 VPS37CA5D8V6 355 aaPredicted RBP15.78■□□□□ 0.12
PTN-202ENST00000393083 CPLX1O14810 134 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 ZSCAN22P10073 491 aaPredicted RBP15.78■□□□□ 0.12
PTN-202ENST00000393083 USP14P54578 494 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 ZYXQ15942 572 aaKnown RBP15.78■□□□□ 0.12
PTN-202ENST00000393083 KIAA1755Q5JYT7 1200 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 LARP1BQ659C4 914 aaKnown RBP15.78■□□□□ 0.12
PTN-202ENST00000393083 CCDC144CPQ8IYA2 1237 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 ZNF654Q8IZM8 581 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 ARHGEF10LQ9HCE6 1279 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 TMOD4Q9NZQ9 345 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 KIF3AQ9Y496 699 aa15.78■□□□□ 0.12
PTN-202ENST00000393083 MYH4Q9Y623 1939 aa15.77■□□□□ 0.12
PTN-202ENST00000393083 NMT2O60551 498 aa15.77■□□□□ 0.11
PTN-202ENST00000393083 BAG4O95429 457 aaKnown RBP15.77■□□□□ 0.11
PTN-202ENST00000393083 HOXA7P31268 230 aaPredicted RBP15.77■□□□□ 0.11
PTN-202ENST00000393083 NOVP48745 357 aa15.77■□□□□ 0.11
PTN-202ENST00000393083 TAF1CQ15572 869 aaPredicted RBP15.77■□□□□ 0.11
PTN-202ENST00000393083 MKL1Q969V6 931 aa15.77■□□□□ 0.11
PTN-202ENST00000393083 MTMR6Q9Y217 621 aa15.77■□□□□ 0.11
PTN-202ENST00000393083 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
PTN-202ENST00000393083 LBX1P52954 281 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 RCAN1P53805 252 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 ATP2B2Q01814 1243 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms