RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SKILP12757 684 aa29.18■■■□□ 2.26
SMARCD3-203ENST00000392811 RASGRP2Q7LDG7 609 aa29.18■■■□□ 2.26
SMARCD3-203ENST00000392811 LZTS2Q9BRK4 669 aa29.18■■■□□ 2.26
SMARCD3-203ENST00000392811 ZC3H12CQ9C0D7 883 aaKnown RBP29.18■■■□□ 2.26
SMARCD3-203ENST00000392811 FANCLQ9NW38 375 aa29.18■■■□□ 2.26
SMARCD3-203ENST00000392811 PLSCR1O15162 318 aa29.17■■■□□ 2.26
SMARCD3-203ENST00000392811 CERS5Q8N5B7 392 aa29.17■■■□□ 2.26
SMARCD3-203ENST00000392811 F8W031 263 aaPredicted RBP29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 HEATR3Q7Z4Q2 680 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 SH3RF1Q7Z6J0 888 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 MYRIPQ8NFW9 859 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 RASGRP4Q8TDF6 673 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 CCDC34Q96HJ3 373 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 SUGT1Q9Y2Z0 365 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 KLRF2D3W0D1 207 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 M0R2N6 131 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 MYO1BO43795 1136 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 CEP95Q96GE4 821 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 PAGE5Q96GU1 130 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 DACH1Q9UI36 760 aa29.16■■■□□ 2.26
SMARCD3-203ENST00000392811 STXBP3O00186 592 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 APBA3O96018 575 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 AFMP43652 599 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 IL17AQ16552 155 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 CCDC148Q8NFR7 591 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 DPF2Q92785 391 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 BARHL2Q9NY43 387 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 COL11A2P13942 1736 aaPredicted RBP29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 SERPINC1P01008 464 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 UBASH3AP57075 661 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 FMR1Q06787 632 aaKnown RBP eCLIP29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 PICALMQ13492 652 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 DPP8Q6V1X1 898 aaPredicted RBP29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 DAGLBQ8NCG7 672 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 SPZ1Q9BXG8 430 aa29.15■■■□□ 2.26
SMARCD3-203ENST00000392811 QSER1Q2KHR3 1735 aa29.14■■■□□ 2.26
SMARCD3-203ENST00000392811 MMP10P09238 476 aa29.14■■■□□ 2.26
SMARCD3-203ENST00000392811 TOP1P11387 765 aaKnown RBP29.14■■■□□ 2.26
SMARCD3-203ENST00000392811 ALDH1B1P30837 517 aa29.14■■■□□ 2.26
SMARCD3-203ENST00000392811 DOK7Q18PE1 504 aa29.14■■■□□ 2.26
SMARCD3-203ENST00000392811 MXD3Q9BW11 206 aa29.14■■■□□ 2.26
SMARCD3-203ENST00000392811 CPVLQ9H3G5 476 aa29.14■■■□□ 2.26
SMARCD3-203ENST00000392811 CBFA2T2O43439 604 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 PARP1P09874 1014 aaKnown RBP29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 PDE6BP35913 854 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 C4orf32Q8N8J7 132 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 PCDHA6Q9UN73 950 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 TTF2Q9UNY4 1162 aaKnown RBP29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 PCDHA8Q9Y5H6 950 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 NOVP48745 357 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 GALNT17Q6IS24 598 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 ARMCX5Q6P1M9 558 aa29.13■■■□□ 2.25
SMARCD3-203ENST00000392811 CCDC194A0A1B0GVG4 234 aa29.12■■■□□ 2.25
SMARCD3-203ENST00000392811 USP17L2Q6R6M4 530 aa29.12■■■□□ 2.25
SMARCD3-203ENST00000392811 CCDC150Q8NCX0 1101 aa29.12■■■□□ 2.25
SMARCD3-203ENST00000392811 C16orf45Q96MC5 204 aaPredicted RBP29.12■■■□□ 2.25
SMARCD3-203ENST00000392811 PARP3Q9Y6F1 533 aa29.12■■■□□ 2.25
SMARCD3-203ENST00000392811 CASP1P29466 404 aa29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 ARL6IP4Q66PJ3 421 aaKnown RBP29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 ENOX1Q8TC92 643 aaKnown RBP29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 DYNC1I1O14576 645 aa29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 DPYDQ12882 1025 aa29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 TPD52L1Q16890 204 aaPredicted RBP29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 CFAP100Q494V2 611 aa29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 MASTLQ96GX5 879 aa29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 DDX4Q9NQI0 724 aaKnown RBP29.11■■■□□ 2.25
SMARCD3-203ENST00000392811 GABPAQ06546 454 aa29.1■■■□□ 2.25
SMARCD3-203ENST00000392811 E2F4Q16254 413 aa29.1■■■□□ 2.25
SMARCD3-203ENST00000392811 TRMT44Q8IYL2 757 aaKnown RBP29.1■■■□□ 2.25
SMARCD3-203ENST00000392811 FLAD1Q8NFF5 587 aa29.1■■■□□ 2.25
SMARCD3-203ENST00000392811 MED15Q96RN5 788 aa29.1■■■□□ 2.25
SMARCD3-203ENST00000392811 NFE2L3Q9Y4A8 694 aa29.1■■■□□ 2.25
SMARCD3-203ENST00000392811 FAM177A1Q8N128 213 aaPredicted RBP29.1■■■□□ 2.25
SMARCD3-203ENST00000392811 PLIN4Q96Q06 1357 aa29.09■■■□□ 2.25
SMARCD3-203ENST00000392811 USP27XA6NNY8 438 aa29.09■■■□□ 2.25
SMARCD3-203ENST00000392811 IQUBQ8NA54 791 aa29.09■■■□□ 2.25
SMARCD3-203ENST00000392811 ZNF18P17022 549 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 SFPQP23246 707 aaKnown RBP eCLIP29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 SCNN1DP51172 638 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 USP40Q9NVE5 1235 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 ADAMTSL1Q8N6G6 1762 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 ERCC5P28715 1186 aaPredicted RBP29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 LONP1P36776 959 aaKnown RBP29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 DHX8Q14562 1220 aaKnown RBP29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 INF2Q27J81 1249 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 HSP90AA4PQ58FG1 418 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 MSL1Q68DK7 614 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 GSDMAQ96QA5 445 aa29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 TMX4Q9H1E5 349 aaPredicted RBP29.08■■■□□ 2.25
SMARCD3-203ENST00000392811 USP17L5A8MUK1 530 aa29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 NAPAP54920 295 aa29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 PDXDC2PQ6P474 469 aa29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 HOMER1Q86YM7 354 aa29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 RRP36Q96EU6 259 aaKnown RBP29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 PYM1Q9BRP8 204 aaKnown RBP29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 ZMYND12Q9H0C1 365 aa29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 MTMR4Q9NYA4 1195 aa29.07■■■□□ 2.24
SMARCD3-203ENST00000392811 TMEM232C9JQI7 657 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 G3V3G9 751 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 TNNT1P13805 278 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms