RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 ATP2C2O75185 946 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 GCNT3O95395 438 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 TTC4O95801 387 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 TROVE2P10155 538 aaKnown RBP eCLIP4.38□□□□□ -1.71
UBR3-202ENST00000392632 KRT15P19012 456 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 KCNA4P22459 653 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 ITGA6P23229 1130 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 FBXW4P57775 412 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 ATP11AP98196 1134 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 DMP1Q13316 513 aaPredicted RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 CCDC122Q5T0U0 273 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 E4F1Q66K89 784 aaPredicted RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 FBXO11Q86XK2 927 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 SRRM1Q8IYB3 904 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 RTKN2Q8IZC4 609 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 RAB42Q8N4Z0 105 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 TRIM11Q96F44 468 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 AMNQ9BXJ7 453 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 FTOQ9C0B1 505 aaKnown RBP eCLIP4.38□□□□□ -1.71
UBR3-202ENST00000392632 RAB17Q9H0T7 212 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 RBSNQ9H1K0 784 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 UBN1Q9NPG3 1134 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 FAN1Q9Y2M0 1017 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 COL4A3BPQ9Y5P4 624 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 VWA3AA6NCI4 1184 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 NBPF26B4DH59 902 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 SEMA3EO15041 775 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 TMCC1O94876 653 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 SETSIPP0DME0 302 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 SKILP12757 684 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 SYT1P21579 422 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 GBP1P32455 592 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 GTF2IP78347 998 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 MYL5Q02045 173 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 TSNAXIP1Q2TAA8 658 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 PRR16Q569H4 304 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 CTAGE3PQ8IX95 158 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 TBC1D19Q8N5T2 526 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ANKRD44Q8N8A2 993 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 MLKLQ8NB16 471 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 GDAP1Q8TB36 358 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 RBM46Q8TBY0 533 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 HDAC11Q96DB2 347 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 QTRT2Q9H974 415 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 LRRC4Q9HBW1 653 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ANGEL1Q9UNK9 670 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 FNDC3AQ9Y2H6 1198 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 DDX39AO00148 427 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 GRIN3BO60391 1043 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 CCNT1O60563 726 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 BBOX1O75936 387 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 CA4P22748 312 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 PRIM1P49642 420 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 STX1BP61266 288 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 TCP10Q12799 353 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 DALRD3Q5D0E6 543 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 CEP85LQ5SZL2 805 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 B4GALNT4Q76KP1 1039 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 VSIG1Q86XK7 387 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 IFT20Q8IY31 132 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ANKRD36BP1Q96IX9 119 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 LLPHQ9BRT6 129 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 TRIM62Q9BVG3 475 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 TYW1Q9NV66 732 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 SLAIN2Q9P270 581 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 DNAI1Q9UI46 699 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 GUCA1BQ9UMX6 200 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 USTQ9Y2C2 406 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 BLMP54132 1417 aaPredicted RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 MAP3K5Q99683 1374 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ERVV-2B6SEH9 535 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 NEMP1O14524 444 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 RNF40O75150 1001 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ICA1Q05084 483 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 MYO1EQ12965 1108 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 TTC38Q5R3I4 469 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 MFSD14CQ5VZR4 134 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ISM2Q6H9L7 571 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 TTBK2Q6IQ55 1244 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 SCYL2Q6P3W7 929 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 SEPT14Q6ZU15 432 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 BZW1Q7L1Q6 419 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 CNPY4Q8N129 248 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 THEM5Q8N1Q8 247 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 UBLCP1Q8WVY7 318 aaPredicted RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 LZICQ8WZA0 190 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 EIF2AQ9BY44 585 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 WDR11Q9BZH6 1224 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 CUEDC2Q9H467 287 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ZHX1Q9UKY1 873 aaPredicted RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 PCDHA1Q9Y5I3 950 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 YTHDC2Q9H6S0 1430 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 ERBB4Q15303 1308 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 ZBBXA8MT70 800 aa4.37□□□□□ -1.71
UBR3-202ENST00000392632 AKR1B15C9JRZ8 316 aaPredicted RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 RNMTO43148 476 aaKnown RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 ZNF189O75820 626 aaPredicted RBP4.37□□□□□ -1.71
UBR3-202ENST00000392632 ANXA1P04083 346 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms