RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 IGKV6D-41A0A0C4DH26 115 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 KLRF2D3W0D1 207 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 CYTH3O43739 400 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 C21orf2O43822 256 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 HLA-DOAP06340 250 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 TPM3P06753 285 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 SLC35G1Q2M3R5 365 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 TTC38Q5R3I4 469 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.96■■□□□ 1.27
PTPN11-202ENST00000392597 BLIDQ8IZY5 108 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 MTMR4Q9NYA4 1195 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 PCDHA4Q9UN74 947 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 BECN2A8MW95 431 aa22.95■■□□□ 1.26
PTPN11-202ENST00000392597 GOLGA6L6A8MZA4 724 aa22.95■■□□□ 1.26
PTPN11-202ENST00000392597 ZNF500O60304 480 aaPredicted RBP22.95■■□□□ 1.26
PTPN11-202ENST00000392597 NPM3O75607 178 aaKnown RBP22.95■■□□□ 1.26
PTPN11-202ENST00000392597 VEGFAP15692 232 aaPredicted RBP22.95■■□□□ 1.26
PTPN11-202ENST00000392597 ATP2B1P20020 1258 aa22.95■■□□□ 1.26
PTPN11-202ENST00000392597 PLA2G4DQ86XP0 818 aa22.95■■□□□ 1.26
PTPN11-202ENST00000392597 ERCC4Q92889 916 aaPredicted RBP22.95■■□□□ 1.26
PTPN11-202ENST00000392597 BARHL2Q9NY43 387 aa22.95■■□□□ 1.26
PTPN11-202ENST00000392597 CCDC93Q567U6 631 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 DHX40Q8IX18 779 aaKnown RBP22.94■■□□□ 1.26
PTPN11-202ENST00000392597 CNNM3Q8NE01 707 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 KCNQ5Q9NR82 932 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 SERPINA10Q9UK55 444 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 GRIN1Q05586 938 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 LONRF3Q496Y0 759 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 PPP4R3BQ5MIZ7 849 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 PIBF1Q8WXW3 757 aa22.94■■□□□ 1.26
PTPN11-202ENST00000392597 DHX36Q9H2U1 1008 aaKnown RBP22.94■■□□□ 1.26
PTPN11-202ENST00000392597 GREB1LQ9C091 1923 aaPredicted RBP22.93■■□□□ 1.26
PTPN11-202ENST00000392597 ZNF75DP51815 510 aa22.93■■□□□ 1.26
PTPN11-202ENST00000392597 ATP2C1P98194 919 aaPredicted RBP22.93■■□□□ 1.26
PTPN11-202ENST00000392597 WWC2Q6AWC2 1192 aa22.93■■□□□ 1.26
PTPN11-202ENST00000392597 KANK3Q6NY19 840 aa22.93■■□□□ 1.26
PTPN11-202ENST00000392597 IDI2Q9BXS1 227 aa22.93■■□□□ 1.26
PTPN11-202ENST00000392597 CSRNP2Q9H175 543 aa22.93■■□□□ 1.26
PTPN11-202ENST00000392597 ZNF219Q9P2Y4 722 aaPredicted RBP22.93■■□□□ 1.26
PTPN11-202ENST00000392597 M0R2N6 131 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 STXBP3O00186 592 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 CDC25BP30305 580 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 DPCR1Q3MIW9 517 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 PIK3AP1Q6ZUJ8 805 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 METTL16Q86W50 562 aaKnown RBP22.92■■□□□ 1.26
PTPN11-202ENST00000392597 KIAA0825Q8IV33 1275 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 RTKN2Q8IZC4 609 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 CCDC12Q8WUD4 166 aaPredicted RBP22.92■■□□□ 1.26
PTPN11-202ENST00000392597 GPKOWQ92917 476 aaPredicted RBP eCLIP22.92■■□□□ 1.26
PTPN11-202ENST00000392597 TRIM5Q9C035 493 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.92■■□□□ 1.26
PTPN11-202ENST00000392597 AKR1B1P15121 316 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 SHMT1P34896 483 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 AOC3Q16853 763 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 ASPRV1Q53RT3 343 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 CCDC17Q96LX7 622 aa22.92■■□□□ 1.26
PTPN11-202ENST00000392597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.92■■□□□ 1.26
PTPN11-202ENST00000392597 PSME4Q14997 1843 aa22.91■■□□□ 1.26
PTPN11-202ENST00000392597 MDM2Q00987 491 aaPredicted RBP22.91■■□□□ 1.26
PTPN11-202ENST00000392597 NOM1Q5C9Z4 860 aaKnown RBP22.91■■□□□ 1.26
PTPN11-202ENST00000392597 RRP36Q96EU6 259 aaKnown RBP22.91■■□□□ 1.26
PTPN11-202ENST00000392597 FER1L6Q2WGJ9 1857 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 POLR2DO15514 142 aaKnown RBP22.9■■□□□ 1.26
PTPN11-202ENST00000392597 TTLL1O95922 423 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 SNHG28P0DPA3 235 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 NFIAQ12857 509 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 ZNF174Q15697 407 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 SPECC1Q5M775 1068 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 TYW1BQ6NUM6 668 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 USP17L2Q6R6M4 530 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 HEATR3Q7Z4Q2 680 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 CCDC34Q96HJ3 373 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 MTMR7Q9Y216 660 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 A0A087WWV3 80 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 hCG_1984214I3L0E3 225 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 GOLGA8HP0CJ92 632 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 PDHBP11177 359 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 PTGDRQ13258 359 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 PNOCQ13519 176 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 AOPEPQ8N6M6 819 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 ZNF713Q8N859 430 aaPredicted RBP22.9■■□□□ 1.26
PTPN11-202ENST00000392597 ZMYND12Q9H0C1 365 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 RIOX1Q9H6W3 641 aa22.9■■□□□ 1.26
PTPN11-202ENST00000392597 WNT7AO00755 349 aa22.89■■□□□ 1.25
PTPN11-202ENST00000392597 ARL6IP4Q66PJ3 421 aaKnown RBP22.89■■□□□ 1.25
PTPN11-202ENST00000392597 MRFAP1L1Q96HT8 127 aa22.89■■□□□ 1.25
PTPN11-202ENST00000392597 PSMD1Q99460 953 aa22.89■■□□□ 1.25
PTPN11-202ENST00000392597 SEC63Q9UGP8 760 aaKnown RBP22.89■■□□□ 1.25
PTPN11-202ENST00000392597 SMTNL1A8MU46 457 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 USP17L5A8MUK1 530 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 POSTNQ15063 836 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 NT5DC1Q5TFE4 455 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 SIPA1L1O43166 1804 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 CCDC194A0A1B0GVG4 234 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 BIN1O00499 593 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 IKBKBO14920 756 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 PPIP5K2O43314 1243 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 ACTN4O43707 911 aaKnown RBP22.88■■□□□ 1.25
PTPN11-202ENST00000392597 PI4KBQ9UBF8 816 aa22.88■■□□□ 1.25
PTPN11-202ENST00000392597 PCDHA6Q9UN73 950 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 690.1 ms