RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 LRRN4CLQ8ND94 238 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 CTAGE1Q96RT6 745 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 SRRTQ9BXP5 876 aaKnown RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 ADD3Q9UEY8 706 aaKnown RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 FANCGO15287 622 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 PBX1P40424 430 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 GSTO1P78417 241 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 GRAPQ13588 217 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 TOGARAM2Q6ZUX3 1019 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
RFC5-201ENST00000392542 SH3RF3Q8TEJ3 882 aaPredicted RBP13.95□□□□□ -0.18
RFC5-201ENST00000392542 STAMQ92783 540 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 DYNLL2Q96FJ2 89 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 PANX2Q96RD6 677 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 PCDHA4Q9UN74 947 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 LONP1P36776 959 aaKnown RBP13.95□□□□□ -0.18
RFC5-201ENST00000392542 GNAQP50148 359 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 ERCC6LQ2NKX8 1250 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 C4orf32Q8N8J7 132 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 GPKOWQ92917 476 aaPredicted RBP eCLIP13.95□□□□□ -0.185e-6■□□□□ 10.8
RFC5-201ENST00000392542 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 ANKIB1Q9P2G1 1089 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 CTNND2Q9UQB3 1225 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 FAM205AQ6ZU69 1335 aa13.95□□□□□ -0.18
RFC5-201ENST00000392542 NPHP1O15259 732 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 ZSCAN20P17040 1043 aaPredicted RBP13.94□□□□□ -0.18
RFC5-201ENST00000392542 PPP4CP60510 307 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 FILIP1LQ4L180 1135 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 STAG2Q8N3U4 1231 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 IGSF22Q8N9C0 903 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 MKNK2Q9HBH9 465 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 MAD2L2Q9UI95 211 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 LY75O60449 1722 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 URI1O94763 535 aaPredicted RBP13.94□□□□□ -0.18
RFC5-201ENST00000392542 BAG3O95817 575 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 PPFIBP1Q86W92 1011 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 NGLY1Q96IV0 654 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 MTRQ99707 1265 aa13.94□□□□□ -0.18
RFC5-201ENST00000392542 M0R2N6 131 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 H2AFXP16104 143 aaPredicted RBP13.93□□□□□ -0.18
RFC5-201ENST00000392542 TXLNAP40222 546 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 RRAGBQ5VZM2 374 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 NAA15Q9BXJ9 866 aaKnown RBP13.93□□□□□ -0.18
RFC5-201ENST00000392542 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 RWDD2AQ9UIY3 292 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 USP17L3A6NCW0 530 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 USP17L4A6NCW7 530 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 LDHCP07864 332 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 TSPY3P0CV98 308 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 TSPY8P0CW00 308 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 CASQ1P31415 396 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 GNG11P61952 73 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 RBL2Q08999 1139 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 DIXDC1Q155Q3 683 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 GRIK5Q16478 980 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 TYW1BQ6NUM6 668 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 USP17L1Q7RTZ2 530 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 ZNF804AQ7Z570 1209 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 SLC51AQ86UW1 340 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
RFC5-201ENST00000392542 DAGLBQ8NCG7 672 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 CCDC148Q8NFR7 591 aa13.93□□□□□ -0.18
RFC5-201ENST00000392542 LIMA1Q9UHB6 759 aaKnown RBP13.93□□□□□ -0.18
RFC5-201ENST00000392542 ITIH6Q6UXX5 1313 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 CCDC194A0A1B0GVG4 234 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 DMTNQ08495 405 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 ZNF658Q5TYW1 1059 aaPredicted RBP13.92□□□□□ -0.18
RFC5-201ENST00000392542 GALNT17Q6IS24 598 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 C15orf52Q6ZUT6 534 aaKnown RBP13.92□□□□□ -0.18
RFC5-201ENST00000392542 ZNF444Q8N0Y2 327 aaPredicted RBP13.92□□□□□ -0.18
RFC5-201ENST00000392542 MNS1Q8NEH6 495 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 CDK5RAP2Q96SN8 1893 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 TADA3O75528 432 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 RPN1P04843 607 aaKnown RBP13.92□□□□□ -0.18
RFC5-201ENST00000392542 RFC4P35249 363 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 SPAG1Q07617 926 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 PAK1Q13153 545 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 NFIXQ14938 502 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
RFC5-201ENST00000392542 WWC2Q6AWC2 1192 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 WDR24Q96S15 920 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 DESI2Q9BSY9 194 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 PCDHA6Q9UN73 950 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 PCDHA8Q9Y5H6 950 aa13.92□□□□□ -0.18
RFC5-201ENST00000392542 MFAP3LO75121 409 aa13.91□□□□□ -0.18
RFC5-201ENST00000392542 CCDC175P0C221 793 aa13.91□□□□□ -0.18
RFC5-201ENST00000392542 STAT6P42226 847 aa13.91□□□□□ -0.18
RFC5-201ENST00000392542 MTF1Q14872 753 aa13.91□□□□□ -0.18
RFC5-201ENST00000392542 ARHGAP29Q52LW3 1261 aa13.91□□□□□ -0.18
RFC5-201ENST00000392542 UBXN4Q92575 508 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms