RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 NAV1Q8NEY1 1877 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.55
LTN1-203ENST00000389195 GRM4Q14833 912 aa11.65□□□□□ -0.55
LTN1-203ENST00000389195 ZYXQ15942 572 aaKnown RBP11.65□□□□□ -0.55
LTN1-203ENST00000389195 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.55
LTN1-203ENST00000389195 JAKMIP3Q5VZ66 844 aa11.65□□□□□ -0.55
LTN1-203ENST00000389195 TMC4Q7Z404 712 aa11.65□□□□□ -0.55
LTN1-203ENST00000389195 METTL16Q86W50 562 aaKnown RBP11.65□□□□□ -0.55
LTN1-203ENST00000389195 SLF2Q8IX21 1173 aa11.65□□□□□ -0.55
LTN1-203ENST00000389195 KRI1Q8N9T8 703 aaKnown RBP11.65□□□□□ -0.55
LTN1-203ENST00000389195 DHX58Q96C10 678 aa11.65□□□□□ -0.55
LTN1-203ENST00000389195 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 PALM3A6NDB9 673 aaPredicted RBP11.64□□□□□ -0.55
LTN1-203ENST00000389195 PARP1P09874 1014 aaKnown RBP11.64□□□□□ -0.55
LTN1-203ENST00000389195 CALM1P0DP23 149 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 CALM2P0DP24 149 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 CALM3P0DP25 149 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 PDHBP11177 359 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 RBM43Q6ZSC3 357 aaKnown RBP11.64□□□□□ -0.55
LTN1-203ENST00000389195 SMYD4Q8IYR2 804 aaPredicted RBP11.64□□□□□ -0.55
LTN1-203ENST00000389195 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 LRRC37AA6NMS7 1700 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 PCP11498 1178 aaKnown RBP11.64□□□□□ -0.55
LTN1-203ENST00000389195 KIF5BP33176 963 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 DGKZQ13574 1117 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 PRAMEF18Q5VWM3 479 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 CNNM3Q8NE01 707 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 TNFRSF25Q93038 417 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 TRIM5Q9C035 493 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 TMEM60Q9H2L4 133 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 BCS1LQ9Y276 419 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 LAMB1P07942 1786 aa11.64□□□□□ -0.55
LTN1-203ENST00000389195 ASTN2O75129 1339 aaPredicted RBP11.63□□□□□ -0.55
LTN1-203ENST00000389195 TRIM75PA6NK02 468 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 BMP6P22004 513 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 CCDC96Q2M329 555 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 RESP18Q5W5W9 173 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 DHX40Q8IX18 779 aaKnown RBP11.63□□□□□ -0.55
LTN1-203ENST00000389195 ZDHHC15Q96MV8 337 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 TMEM39BQ9GZU3 492 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
LTN1-203ENST00000389195 NID2Q14112 1375 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 A0A1W2PQ27 194 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 A0A1W2PQ64 194 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 A0A1W2PQD8 194 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 USP17L10C9JJH3 530 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 EEF2P13639 858 aaKnown RBP11.63□□□□□ -0.55
LTN1-203ENST00000389195 XBP1P17861 261 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 NAPAP54920 295 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 LRMPQ12912 555 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 IQCB1Q15051 598 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 UBE2SQ16763 222 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 TTC38Q5R3I4 469 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 DLK2Q6UY11 383 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 DRC7Q8IY82 874 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 SYMPKQ92797 1274 aaKnown RBP11.63□□□□□ -0.55
LTN1-203ENST00000389195 BLZF1Q9H2G9 400 aa11.63□□□□□ -0.55
LTN1-203ENST00000389195 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 STXBP3O00186 592 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 PPP1R11O60927 126 aaPredicted RBP11.62□□□□□ -0.55
LTN1-203ENST00000389195 ECE1P42892 770 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 ATL3Q6DD88 541 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 HHIPL2Q6UWX4 724 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 BLIDQ8IZY5 108 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
LTN1-203ENST00000389195 CSRNP1Q96S65 589 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 PCDHA6Q9UN73 950 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 PCDHA8Q9Y5H6 950 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 SMCHD1A6NHR9 2005 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 SMCO2A6NFE2 343 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 PPP6R2O75170 966 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 PTPREP23469 700 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 LMOD1P29536 600 aaPredicted RBP11.62□□□□□ -0.55
LTN1-203ENST00000389195 LETM2Q2VYF4 491 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 CERKLQ49MI3 558 aaPredicted RBP11.62□□□□□ -0.55
LTN1-203ENST00000389195 SIAH1Q8IUQ4 282 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
LTN1-203ENST00000389195 HPSEQ9Y251 543 aa11.62□□□□□ -0.55
LTN1-203ENST00000389195 BECN2A8MW95 431 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 GH2P01242 217 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 TOP1P11387 765 aaKnown RBP11.61□□□□□ -0.55
LTN1-203ENST00000389195 RASSF7Q02833 373 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 EEF2KMTQ96G04 330 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 PTGS1P23219 599 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 ADGRF4Q8IZF3 695 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 NLGN2Q8NFZ4 835 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 FBXO41Q8TF61 875 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 GLIS2Q9BZE0 524 aaPredicted RBP11.61□□□□□ -0.55
LTN1-203ENST00000389195 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
LTN1-203ENST00000389195 MAPK8IP1Q9UQF2 711 aa11.61□□□□□ -0.55
LTN1-203ENST00000389195 HLA-DOAP06340 250 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 CXCL9Q07325 125 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms