RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 MKNK2Q9HBH9 465 aa31.63■■■□□ 2.65
NPHP3-202ENST00000383282 RLFQ13129 1914 aa31.63■■■□□ 2.65
NPHP3-202ENST00000383282 ZFYP08048 801 aaPredicted RBP31.62■■■□□ 2.65
NPHP3-202ENST00000383282 ADAMTS5Q9UNA0 930 aa31.62■■■□□ 2.65
NPHP3-202ENST00000383282 SEPT4O43236 478 aa31.61■■■□□ 2.65
NPHP3-202ENST00000383282 LRRFIP1Q32MZ4 808 aaKnown RBP31.61■■■□□ 2.65
NPHP3-202ENST00000383282 LRIT3Q3SXY7 679 aa31.61■■■□□ 2.65
NPHP3-202ENST00000383282 OSBP2Q969R2 916 aa31.61■■■□□ 2.65
NPHP3-202ENST00000383282 PPP1R9AQ9ULJ8 1098 aa31.61■■■□□ 2.65
NPHP3-202ENST00000383282 FRMPD3Q5JV73 1810 aa31.61■■■□□ 2.65
NPHP3-202ENST00000383282 GSG1L2A8MUP6 293 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 MINDY4BA8MYZ0 360 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 KBTBD13C9JR72 458 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 RNF113AO15541 343 aaKnown RBP31.6■■■□□ 2.65
NPHP3-202ENST00000383282 GNAT2P19087 354 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 COPB2P35606 906 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 GPR153Q6NV75 609 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 RIOX2Q8IUF8 465 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 MAML3Q96JK9 1138 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 MMP19Q99542 508 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 FBXO28Q9NVF7 368 aa31.6■■■□□ 2.65
NPHP3-202ENST00000383282 ATN1P54259 1190 aaPredicted RBP31.59■■■□□ 2.65
NPHP3-202ENST00000383282 FAM83BQ5T0W9 1011 aa31.59■■■□□ 2.65
NPHP3-202ENST00000383282 GJC2Q5T442 439 aaPredicted RBP31.59■■■□□ 2.65
NPHP3-202ENST00000383282 TSHZ3Q63HK5 1081 aa31.59■■■□□ 2.65
NPHP3-202ENST00000383282 STK11IPQ8N1F8 1099 aa31.59■■■□□ 2.65
NPHP3-202ENST00000383282 ZNF287Q9HBT7 754 aa31.59■■■□□ 2.65
NPHP3-202ENST00000383282 VWA5AO00534 786 aa31.58■■■□□ 2.65
NPHP3-202ENST00000383282 RASA1P20936 1047 aa31.58■■■□□ 2.65
NPHP3-202ENST00000383282 STAT3P40763 770 aa31.58■■■□□ 2.65
NPHP3-202ENST00000383282 TDO2P48775 406 aa31.58■■■□□ 2.65
NPHP3-202ENST00000383282 MDM2Q00987 491 aaPredicted RBP31.58■■■□□ 2.65
NPHP3-202ENST00000383282 KCTD2Q14681 263 aa31.58■■■□□ 2.65
NPHP3-202ENST00000383282 ANO1Q5XXA6 986 aa31.58■■■□□ 2.65
NPHP3-202ENST00000383282 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.58■■■□□ 2.65
NPHP3-202ENST00000383282 PRKAG2Q9UGJ0 569 aa31.58■■■□□ 2.65
NPHP3-202ENST00000383282 ROBO3Q96MS0 1386 aa31.57■■■□□ 2.64
NPHP3-202ENST00000383282 GPAA1O43292 621 aa31.57■■■□□ 2.64
NPHP3-202ENST00000383282 LBHD1Q9BQE6 289 aaPredicted RBP31.57■■■□□ 2.64
NPHP3-202ENST00000383282 NYAP2Q9P242 653 aa31.57■■■□□ 2.64
NPHP3-202ENST00000383282 MYCNP04198 464 aaPredicted RBP31.56■■■□□ 2.64
NPHP3-202ENST00000383282 APPP05067 770 aa31.56■■■□□ 2.64
NPHP3-202ENST00000383282 PRAMEF19Q5SWL8 479 aa31.56■■■□□ 2.64
NPHP3-202ENST00000383282 NRBP1Q9UHY1 535 aa31.56■■■□□ 2.64
NPHP3-202ENST00000383282 ERC2O15083 957 aa31.55■■■□□ 2.64
NPHP3-202ENST00000383282 RTP1P59025 263 aa31.55■■■□□ 2.64
NPHP3-202ENST00000383282 ZNF444Q8N0Y2 327 aaPredicted RBP31.55■■■□□ 2.64
NPHP3-202ENST00000383282 SLF1Q9BQI6 1058 aa31.55■■■□□ 2.64
NPHP3-202ENST00000383282 DIS3Q9Y2L1 958 aaKnown RBP31.55■■■□□ 2.64
NPHP3-202ENST00000383282 TTC41PQ6P2S7 1318 aa31.54■■■□□ 2.64
NPHP3-202ENST00000383282 ZNF214Q9UL59 606 aaPredicted RBP31.54■■■□□ 2.64
NPHP3-202ENST00000383282 YTHDC1Q96MU7 727 aaKnown RBP31.53■■■□□ 2.64
NPHP3-202ENST00000383282 ATP11BQ9Y2G3 1177 aa31.53■■■□□ 2.64
NPHP3-202ENST00000383282 F5H6K3 240 aa31.52■■■□□ 2.64
NPHP3-202ENST00000383282 PGK2P07205 417 aa31.52■■■□□ 2.64
NPHP3-202ENST00000383282 KLRC3Q07444 240 aa31.52■■■□□ 2.64
NPHP3-202ENST00000383282 REPS2Q8NFH8 660 aa31.52■■■□□ 2.64
NPHP3-202ENST00000383282 NACAP1Q9BZK3 213 aa31.52■■■□□ 2.64
NPHP3-202ENST00000383282 EPB41L4AQ9HCS5 686 aaPredicted RBP31.52■■■□□ 2.64
NPHP3-202ENST00000383282 CLIP2Q9UDT6 1046 aa31.52■■■□□ 2.64
NPHP3-202ENST00000383282 CTDP1Q9Y5B0 961 aaPredicted RBP31.52■■■□□ 2.64
NPHP3-202ENST00000383282 PARP14Q460N5 1801 aa31.52■■■□□ 2.64
NPHP3-202ENST00000383282 PATL2C9JE40 543 aaKnown RBP31.51■■■□□ 2.63
NPHP3-202ENST00000383282 M0R2C6 588 aa31.51■■■□□ 2.63
NPHP3-202ENST00000383282 ZNF792Q3KQV3 632 aa31.51■■■□□ 2.63
NPHP3-202ENST00000383282 SLC39A5Q6ZMH5 540 aa31.51■■■□□ 2.63
NPHP3-202ENST00000383282 NUP88Q99567 741 aaPredicted RBP31.51■■■□□ 2.63
NPHP3-202ENST00000383282 TINF2Q9BSI4 451 aa31.51■■■□□ 2.63
NPHP3-202ENST00000383282 TEX13BQ9BXU2 312 aa31.51■■■□□ 2.63
NPHP3-202ENST00000383282 NDUFB10O96000 172 aa31.5■■■□□ 2.63
NPHP3-202ENST00000383282 RARBP10826 455 aa31.5■■■□□ 2.63
NPHP3-202ENST00000383282 LRRC41Q15345 812 aa31.5■■■□□ 2.63
NPHP3-202ENST00000383282 FAM47AQ5JRC9 791 aa31.5■■■□□ 2.63
NPHP3-202ENST00000383282 DEFB123Q8N688 67 aa31.5■■■□□ 2.63
NPHP3-202ENST00000383282 PRPF38AQ8NAV1 312 aaKnown RBP31.5■■■□□ 2.63
NPHP3-202ENST00000383282 SNRNP48Q6IEG0 339 aaKnown RBP31.49■■■□□ 2.63
NPHP3-202ENST00000383282 IFNL3Q8IZI9 196 aa31.49■■■□□ 2.63
NPHP3-202ENST00000383282 FSD1Q9BTV5 496 aa31.49■■■□□ 2.63
NPHP3-202ENST00000383282 GREB1LQ9C091 1923 aaPredicted RBP31.49■■■□□ 2.63
NPHP3-202ENST00000383282 COL11A1P12107 1806 aaPredicted RBP31.48■■■□□ 2.63
NPHP3-202ENST00000383282 ZBED4O75132 1171 aa31.48■■■□□ 2.63
NPHP3-202ENST00000383282 PRDM1O75626 825 aa31.48■■■□□ 2.63
NPHP3-202ENST00000383282 XPNPEP3Q9NQH7 507 aa31.48■■■□□ 2.63
NPHP3-202ENST00000383282 SYNPO2Q9UMS6 1093 aa31.48■■■□□ 2.63
NPHP3-202ENST00000383282 CNPY2Q9Y2B0 182 aa31.48■■■□□ 2.63
NPHP3-202ENST00000383282 IGKV6D-41A0A0C4DH26 115 aa31.47■■■□□ 2.63
NPHP3-202ENST00000383282 SLC3A2P08195 630 aaKnown RBP31.47■■■□□ 2.63
NPHP3-202ENST00000383282 ADCYAP1R1P41586 468 aa31.47■■■□□ 2.63
NPHP3-202ENST00000383282 TTLL1O95922 423 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 PDE4BQ07343 736 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 RNF180Q86T96 592 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 MKL1Q969V6 931 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 DDX11Q96FC9 970 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 CEP95Q96GE4 821 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 MTMR4Q9NYA4 1195 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 PCDHB15Q9Y5E8 787 aa31.46■■■□□ 2.63
NPHP3-202ENST00000383282 DNAH12Q6ZR08 3092 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 TSPY3P0CV98 308 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 TSPY8P0CW00 308 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 AKR1A1P14550 325 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms