RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 GEMIN4P57678 1058 aaKnown RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 RHBDL3P58872 404 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 PLCB3Q01970 1234 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 GUCY1B3Q02153 619 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ARID5BQ14865 1188 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 CEP85LQ5SZL2 805 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ELMSAN1Q6PJG2 1045 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 FAM43BQ6ZT52 329 aaPredicted RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 CEP57Q86XR8 500 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 EFCAB3Q8N7B9 438 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.34□□□□□ -1.39
RFC1-202ENST00000381897 FAM53CQ9NYF3 392 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 RTEL1Q9NZ71 1219 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 TSR3Q9UJK0 312 aaKnown RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 NPATQ14207 1427 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ARHGEF40Q8TER5 1519 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 CHUKO15111 745 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 PFKFB2O60825 505 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ABCD1P33897 745 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ZKSCAN8Q15776 578 aaPredicted RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 MCMDC2Q4G0Z9 681 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 NME9Q86XW9 330 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 PLSCR2Q9NRY7 297 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 SUFUQ9UMX1 484 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 ATP7BP35670 1465 aa6.34□□□□□ -1.4
RFC1-202ENST00000381897 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 CCT2P78371 535 aaKnown RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 KRT17Q04695 432 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 PPP1R18Q6NYC8 613 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 RIC3Q7Z5B4 369 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 MAP4K1Q92918 833 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 ARHGAP26Q9UNA1 814 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 CCDC61Q9Y6R9 512 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 GOLGA8BA8MQT2 603 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 NEBLO76041 1014 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 CMA1P23946 247 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 MTX1Q13505 466 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 NAA25Q14CX7 972 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 KIAA0753Q2KHM9 967 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 AP1ARQ63HQ0 302 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 USHBP1Q8N6Y0 703 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 TPCN2Q8NHX9 752 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 BCAS4Q8TDM0 211 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 ACTR5Q9H9F9 607 aaPredicted RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 FRMPD1Q5SYB0 1578 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 HNRNPCL2B2RXH8 293 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 IRF6O14896 467 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 LARGE1O95461 756 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 VAV2P52735 878 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 GNGT1P63211 74 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 PPP2R5CQ13362 524 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 SNCBQ16143 134 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 KRT24Q2M2I5 525 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 CERKQ8TCT0 537 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 MTA3Q9BTC8 594 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 GNL3LQ9NVN8 582 aaKnown RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 CUTAO60888 179 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 DESP17661 470 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 RRM1P23921 792 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 CCT5P48643 541 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 TNNI2P48788 182 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 TTC39AQ5SRH9 613 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 SWT1Q5T5J6 900 aaKnown RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 CCDC129Q6ZRS4 1044 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 ANKS4BQ8N8V4 417 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 IGSF22Q8N9C0 903 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.33□□□□□ -1.4
RFC1-202ENST00000381897 SPDYE1Q8NFV5 336 aaPredicted RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 DHX58Q96C10 678 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 PANX2Q96RD6 677 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 SELENOOQ9BVL4 669 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 SPATS2LQ9NUQ6 558 aaKnown RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 ZNF446Q9NWS9 450 aa6.33□□□□□ -1.4
RFC1-202ENST00000381897 ZCCHC11Q5TAX3 1644 aaKnown RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 YTHDC2Q9H6S0 1430 aaKnown RBP6.33□□□□□ -1.4
RFC1-202ENST00000381897 ANKRD18BA2A2Z9 1011 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 SYNDIG1LA6NDD5 238 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 HIP1RO75146 1068 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 BMP15O95972 392 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 POLR3DP05423 398 aaPredicted RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 CEBPAP49715 358 aaPredicted RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 IRX1P78414 480 aaPredicted RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 PTH1RQ03431 593 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 CCDC93Q567U6 631 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 ARMCX5Q6P1M9 558 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 NOP9Q86U38 636 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 DZIP3Q86Y13 1208 aaKnown RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 RELL1Q8IUW5 271 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 TCEANC2Q96MN5 208 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 RMND1Q9NWS8 449 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 RABL2AQ9UBK7 228 aaPredicted RBP6.32□□□□□ -1.4
RFC1-202ENST00000381897 hCG_1642624A0A1W2PR95 340 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 TACC1O75410 805 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 TTC5Q8N0Z6 440 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 TAGAPQ8N103 731 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 AIDAQ96BJ3 306 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 PGBD1Q96JS3 809 aa6.32□□□□□ -1.4
RFC1-202ENST00000381897 USP28Q96RU2 1077 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms