RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CHD1O14646 1710 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 IARSP41252 1262 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 KIF5AQ12840 1032 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 TRIM14Q14142 442 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 ITIH6Q6UXX5 1313 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 NFXL1Q6ZNB6 911 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 RBM33Q96EV2 1170 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 PAGR1Q9BTK6 254 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 BTBD11A6QL63 1104 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 CDKL5O76039 1030 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 PAFAH1B1P43034 410 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 PSMD2Q13200 908 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 CCDC96Q2M329 555 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 EPHA10Q5JZY3 1008 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 RRAGBQ5VZM2 374 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 ARMC3Q5W041 872 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 C6orf89Q6UWU4 347 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 BATF3Q9NR55 127 aa21.17■□□□□ 0.98
SMARCD1-201ENST00000381513 MAST3O60307 1309 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 IGSF1Q8N6C5 1336 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 GMNCA6NCL1 334 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 CPLX4Q7Z7G2 160 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 CCDC82Q8N4S0 544 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 MMGT1Q8N4V1 131 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 MAGEC3Q8TD91 643 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 HVCN1Q96D96 273 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 PCMTD1Q96MG8 357 aaPredicted RBP21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 ZNHIT6Q9NWK9 470 aaKnown RBP21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 FECHP22830 423 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 CYLC1P35663 651 aaPredicted RBP21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 NCOA7Q8NI08 942 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 ATP6V1G3Q96LB4 118 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 TRPC6Q9Y210 931 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 KDRP35968 1356 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 PRR36Q9H6K5 1346 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 RCCD1A6NED2 376 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 ATP6V1G2O95670 118 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 BZW1Q7L1Q6 419 aaKnown RBP21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 CUL5Q93034 780 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 SLC26A6Q9BXS9 759 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 BABAM1Q9NWV8 329 aa21.16■□□□□ 0.98
SMARCD1-201ENST00000381513 FAM153BP0C7A2 387 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 CARSP49589 748 aaKnown RBP21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 CUL4BQ13620 913 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 FAM153CQ494X1 144 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 MAB21L3Q8N8X9 362 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 MYL10Q9BUA6 226 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 FAM153AQ9UHL3 310 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 ACTN4O43707 911 aaKnown RBP21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 TMOD1P28289 359 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 ARFGAP2Q8N6H7 521 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 NUCKS1Q9H1E3 243 aaKnown RBP21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 SLC39A2Q9NP94 309 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 FLT4P35916 1363 aa21.15■□□□□ 0.98
SMARCD1-201ENST00000381513 KCNJ18B7U540 433 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 ANP32DO95626 131 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 DDX58O95786 925 aaKnown RBP21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 PTPREP23469 700 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 GUCY2DQ02846 1103 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 ICA1Q05084 483 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 KCNJ12Q14500 433 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 QPCTQ16769 361 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 ZMYM1Q5SVZ6 1142 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 CREG2Q8IUH2 290 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 NUP133Q8WUM0 1156 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 SEC16BQ96JE7 1060 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 CSRNP2Q9H175 543 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 EPB41L5Q9HCM4 733 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 KCNJ14Q9UNX9 436 aa21.14■□□□□ 0.98
SMARCD1-201ENST00000381513 NBPF9Q3BBW0 867 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 NFRKBQ6P4R8 1299 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 SNX12Q9UMY4 172 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 LEMD3Q9Y2U8 911 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 DLC1Q96QB1 1528 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 ZSCAN5CA6NGD5 496 aaPredicted RBP21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 NBPF10Q6P3W6 841 aaKnown RBP21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 GPIHBP1Q8IV16 184 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 NOSTRINQ8IVI9 506 aa21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 FBXO2Q9UK22 296 aaPredicted RBP21.14■□□□□ 0.97
SMARCD1-201ENST00000381513 ANO9A1A5B4 782 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 RBM5P52756 815 aaKnown RBP eCLIP21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 IFT20Q8IY31 132 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 CCDC47Q96A33 483 aaKnown RBP21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 M0R2C6 588 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 TACC1O75410 805 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 TIMM10P62072 90 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 ELF3P78545 371 aaPredicted RBP21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 SPAG1Q07617 926 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 HAUS3Q68CZ6 603 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 BLZF1Q9H2G9 400 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 PCDHB6Q9Y5E3 794 aa21.13■□□□□ 0.97
SMARCD1-201ENST00000381513 PRAMEF22A3QJZ6 481 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 ZPR1O75312 459 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 DIS3L2Q8IYB7 885 aaKnown RBP21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 FNBP4Q8N3X1 1017 aaPredicted RBP21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 NUP58Q9BVL2 599 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms